RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 TRAPPC2LQ9UL33 140 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 SPATA2Q9UM82 520 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 VSIG4Q9Y279 399 aa5.1□□□□□ -1.59
CD44-221ENST00000526000 A0A075B6Q4 140 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 IGHV4OR15-8A0A075B7B6 117 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 A0A087WW49 117 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 UBE2QL1A1L167 161 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 CCDC160A6NGH7 325 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 I3L521 148 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 ATP6V0E1O15342 81 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 CRTAPO75718 401 aaPredicted RBP5.09□□□□□ -1.59
CD44-221ENST00000526000 OR8U8P0C7N1 319 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 MGMTP16455 207 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 IL3RAP26951 378 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 PSMB8P28062 276 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 BLVRBP30043 206 aaPredicted RBP5.09□□□□□ -1.59
CD44-221ENST00000526000 ACTBP60709 375 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 LSM3P62310 102 aaKnown RBP5.09□□□□□ -1.59
CD44-221ENST00000526000 QRFPP83859 136 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 MXD1Q05195 221 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 P2RY14Q15391 338 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 ECSCRQ19T08 205 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 C2orf76Q3KRA6 126 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 IZUMO1Q8IYV9 350 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 FAM89BQ8N5H3 189 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 TMEM104Q8NE00 496 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 OR10A7Q8NGE5 316 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 ABHD5Q8WTS1 349 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 C15orf40Q8WUR7 153 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 ST6GALNAC6Q969X2 333 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 FAM46BQ96A09 425 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 Q96M66 194 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 ZNF251Q9BRH9 671 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 RSRP1Q9BUV0 290 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 NAA50Q9GZZ1 169 aaKnown RBP5.09□□□□□ -1.59
CD44-221ENST00000526000 OR51J1Q9H342 316 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 RIMS4Q9H426 269 aaPredicted RBP5.09□□□□□ -1.59
CD44-221ENST00000526000 RAB9BQ9NP90 201 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 RCC2Q9P258 522 aaKnown RBP5.09□□□□□ -1.59
CD44-221ENST00000526000 DAPK2Q9UIK4 370 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 ADAM30Q9UKF2 790 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 HSF4Q9ULV5 492 aa5.09□□□□□ -1.59
CD44-221ENST00000526000 IGHV7-81A0A0B4J1V7 117 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 TRAV41A0A0B4J266 112 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 TMEM272A0A1B0GTI8 110 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 A0A1W2PN81 502 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 DPPA5A6NC42 116 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 A6NHS1 94 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 C12orf77C9JDV5 145 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 MCRIP1C9JLW8 97 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 LINC01619G3V211 115 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 FCN1O00602 326 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 PDCD6O75340 191 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 HBZP02008 142 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 APOA1P02647 267 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 CLEC2LP0C7M8 214 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 RCC1P18754 421 aaPredicted RBP5.08□□□□□ -1.6
CD44-221ENST00000526000 FUT3P21217 361 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 PPIFP30405 207 aaKnown RBP5.08□□□□□ -1.6
CD44-221ENST00000526000 CHRNA7P36544 502 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 OR3A3P47888 321 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 INSL3P51460 131 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 OR10A3P58181 314 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 UNC119Q13432 240 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 FHL3Q13643 280 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 GNMTQ14749 295 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 UBE2NLQ5JXB2 153 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 IDNKQ5T6J7 187 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 HES5Q5TA89 166 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 LIN54Q6MZP7 749 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 LINC00299Q6ZSB3 139 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 SLC25A48Q6ZT89 311 aaKnown RBP5.08□□□□□ -1.6
CD44-221ENST00000526000 ZNF554Q86TJ5 538 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 ZNF429Q86V71 674 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 NR2C2APQ86WQ0 139 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 FAM71E2Q8N5Q1 922 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 LINC00311Q8N616 119 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 RNF152Q8N8N0 203 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 DYNC2LI1Q8TCX1 351 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 UBE2E2Q96LR5 201 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 NEDD4LQ96PU5 975 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 OR4C12Q96R67 309 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 CITED4Q96RK1 184 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 MRPL20Q9BYC9 149 aaKnown RBP5.08□□□□□ -1.6
CD44-221ENST00000526000 SELENOIQ9C0D9 397 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 FBXL15Q9H469 300 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 BANF2Q9H503 90 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 RNF167Q9H6Y7 350 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 DIABLOQ9NR28 239 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 RHBDL2Q9NX52 303 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 ETAA1Q9NY74 926 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 MGAT4AQ9UM21 535 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 FBXO7Q9Y3I1 522 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 PEX16Q9Y5Y5 336 aa5.08□□□□□ -1.6
CD44-221ENST00000526000 ANKRD34BA5PLL1 514 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 SPINT2O43291 252 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 ORC5O43913 435 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 SOX15O60248 233 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 IGF1P05019 195 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 GSTP1P09211 210 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms