RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 S1PR2O95136 353 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 CRYBB3P26998 211 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 FOXA3P55318 350 aaPredicted RBP11.9□□□□□ -0.5
LRRK1-202ENST00000525284 CCDC144NLQ6NUI1 221 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 KIR3DL3Q8N743 410 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 TMEM250H0YL14 139 aa11.9□□□□□ -0.51
LRRK1-202ENST00000525284 PSG9Q00887 426 aa11.9□□□□□ -0.51
LRRK1-202ENST00000525284 SPEM2Q0P670 501 aa11.9□□□□□ -0.51
LRRK1-202ENST00000525284 SRSF6Q13247 344 aaKnown RBP11.9□□□□□ -0.51
LRRK1-202ENST00000525284 ACER2Q5QJU3 275 aa11.9□□□□□ -0.51
LRRK1-202ENST00000525284 CFAP161Q6P656 301 aa11.9□□□□□ -0.51
LRRK1-202ENST00000525284 ALKAL1Q6UXT8 129 aa11.9□□□□□ -0.51
LRRK1-202ENST00000525284 C10orf111Q8N326 155 aa11.9□□□□□ -0.51
LRRK1-202ENST00000525284 ZBTB34Q8NCN2 500 aa11.9□□□□□ -0.51
LRRK1-202ENST00000525284 A0A1B0GTL3 188 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 RPL36A-HNRNPH2H7BZ11 118 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 HSPB1P04792 205 aaKnown RBP11.89□□□□□ -0.51
LRRK1-202ENST00000525284 SMDT1Q9H4I9 107 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 hCG_38984A0A1B0GV85 526 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 TNFSF10P50591 281 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 ZNF345Q14585 488 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 CXCL16Q9H2A7 254 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 TUBD1Q9UJT1 453 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 TNFRSF18Q9Y5U5 241 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 ASPDHA6ND91 283 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 CTSVO60911 334 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 HPRT1P00492 218 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 ARL14EPLP0DKL9 152 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 C17orf99Q6UX52 265 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 KLK8O60259 260 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 LAMTOR1Q6IAA8 161 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 SCGB3A1Q96QR1 104 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 ZFP64Q9NPA5 681 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 SOX8P57073 446 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 SPINK14Q6IE38 97 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 TCF23Q7RTU1 214 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 TPRX1Q8N7U7 411 aa11.89□□□□□ -0.51
LRRK1-202ENST00000525284 TNFSF14O43557 240 aa11.88□□□□□ -0.51
LRRK1-202ENST00000525284 HOXD4P09016 255 aaPredicted RBP11.88□□□□□ -0.51
LRRK1-202ENST00000525284 CACNA1SQ13698 1873 aa11.88□□□□□ -0.51
LRRK1-202ENST00000525284 H3BRM9 83 aa11.88□□□□□ -0.51
LRRK1-202ENST00000525284 CXCL2P19875 107 aa11.88□□□□□ -0.51
LRRK1-202ENST00000525284 FAM159AQ6UWV7 190 aa11.88□□□□□ -0.51
LRRK1-202ENST00000525284 DEFB124Q8NES8 71 aa11.88□□□□□ -0.51
LRRK1-202ENST00000525284 SLC25A15Q9Y619 301 aa11.88□□□□□ -0.51
LRRK1-202ENST00000525284 PLCH1Q4KWH8 1693 aa11.88□□□□□ -0.51
LRRK1-202ENST00000525284 SMAD7O15105 426 aaKnown RBP11.88□□□□□ -0.51
LRRK1-202ENST00000525284 K7N7A8 449 aa11.88□□□□□ -0.51
LRRK1-202ENST00000525284 CEACAM4O75871 244 aa11.88□□□□□ -0.51
LRRK1-202ENST00000525284 CEACAM5P06731 702 aa11.88□□□□□ -0.51
LRRK1-202ENST00000525284 RPL31P62899 125 aaKnown RBP11.88□□□□□ -0.51
LRRK1-202ENST00000525284 SNAI3Q3KNW1 292 aa11.88□□□□□ -0.51
LRRK1-202ENST00000525284 UNQ5815/PRO19632Q6UWF5 114 aa11.88□□□□□ -0.51
LRRK1-202ENST00000525284 ANKRD36CQ5JPF3 1778 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 FXYD1O00168 92 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 ISG15P05161 165 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 PRF1P14222 555 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 SRSF5Q13243 272 aaKnown RBP11.87□□□□□ -0.51
LRRK1-202ENST00000525284 DMKNQ6E0U4 476 aaPredicted RBP11.87□□□□□ -0.51
LRRK1-202ENST00000525284 MMD2Q8IY49 270 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 ZNF488Q96MN9 340 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 FOXI3A8MTJ6 420 aaPredicted RBP11.87□□□□□ -0.51
LRRK1-202ENST00000525284 GCM2O75603 506 aaPredicted RBP11.87□□□□□ -0.51
LRRK1-202ENST00000525284 NKX2-2O95096 273 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 CBLN1P23435 193 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 MUC21A0A0G2JKD1 596 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 MUC21A0A140T8X8 626 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 DLL1O00548 723 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 RND2P52198 227 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 MUC21Q5SSG8 566 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 MRGPRX3Q96LB0 322 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 THY1P04216 161 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 WDR54Q9H977 334 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 PLSCR2Q9NRY7 297 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 ASAH2BP0C7U1 165 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 GPR6P46095 362 aaPredicted RBP11.87□□□□□ -0.51
LRRK1-202ENST00000525284 HIKESHIQ53FT3 197 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 ELOVL5Q9NYP7 299 aa11.87□□□□□ -0.51
LRRK1-202ENST00000525284 OR2H1Q9GZK4 316 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 ZNF430Q9H8G1 570 aaPredicted RBP11.86□□□□□ -0.51
LRRK1-202ENST00000525284 A0A0U1RQV5 110 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 LOC390937A0A1W2PQ73 354 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 J3QT63 122 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 M0R381 172 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 NKX2-8O15522 239 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 CDK2AP2O75956 126 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 SDHCQ99643 169 aaPredicted RBP11.86□□□□□ -0.51
LRRK1-202ENST00000525284 LRRC61Q9BV99 259 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 KLK13Q9UKR3 277 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 CDC42EP2O14613 210 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 APOHP02749 345 aaPredicted RBP11.86□□□□□ -0.51
LRRK1-202ENST00000525284 TSPOP30536 169 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 GOLT1AQ6ZVE7 132 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 A0A1W2PP11 408 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 PCMT1P22061 227 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 WDR34Q96EX3 536 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 MIXL1Q9H2W2 232 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 MALP21145 153 aa11.86□□□□□ -0.51
LRRK1-202ENST00000525284 DCAF12L2Q5VW00 463 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms