RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 OR11L1Q8NGX0 322 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 LGALS14Q8TCE9 139 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 ITFG2Q969R8 447 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 SLC25A46Q96AG3 418 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 FAM3DQ96BQ1 224 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 SLC25A38Q96DW6 304 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 SDSLQ96GA7 329 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 COQ2Q96H96 371 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 CEP19Q96LK0 163 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 KCTD7Q96MP8 289 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 GPER1Q99527 375 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 GAL3ST1Q99999 423 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 SULT4A1Q9BR01 284 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 UQCC2Q9BRT2 126 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 HDHD3Q9BSH5 251 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-208ENST00000524652 SLIRPQ9GZT3 109 aaKnown RBP2.35□□□□□ -2.03
CSDE1-208ENST00000524652 CHST6Q9GZX3 395 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 DCSTAMPQ9H295 470 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 PPA2Q9H2U2 334 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 MIXL1Q9H2W2 232 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF665Q9H7R5 613 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 LPAR2Q9HBW0 351 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 MYOZ1Q9NP98 299 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-208ENST00000524652 MMP26Q9NRE1 261 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 C19orf12Q9NSK7 152 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 IL36GQ9NZH8 169 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 KAAG1Q9UBP8 84 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 DAPK2Q9UIK4 370 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 SSR3Q9UNL2 185 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 ING4Q9UNL4 249 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 GSTK1Q9Y2Q3 226 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 POLDIP2Q9Y2S7 368 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 NOP16Q9Y3C1 178 aaKnown RBP2.35□□□□□ -2.03
CSDE1-208ENST00000524652 V9GY05 133 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 MGAM2Q2M2H8 2515 aa2.35□□□□□ -2.03
CSDE1-208ENST00000524652 WNK1Q9H4A3 2382 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 IGKV1D-8A0A087WSZ0 117 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 TRAV38-1A0A0B4J264 116 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 LRRC30A6NM36 301 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 K7N7A8 449 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 CTDSP2O14595 271 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 ATP6V0E1O15342 81 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 SIGLEC5O15389 551 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 MAGEB3O15480 346 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 PEX14O75381 377 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 CRTAPO75718 401 aaPredicted RBP2.34□□□□□ -2.03
CSDE1-208ENST00000524652 MMP23AO75900 390 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 LY6G6DO95868 133 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 HAND1O96004 215 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 EIF4EP06730 217 aaKnown RBP2.34□□□□□ -2.03
CSDE1-208ENST00000524652 ERCC1P07992 297 aaPredicted RBP2.34□□□□□ -2.03
CSDE1-208ENST00000524652 OCMP0CE72 109 aaPredicted RBP2.34□□□□□ -2.03
CSDE1-208ENST00000524652 CGB3P0DN86 165 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 CGB7P0DN87 165 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 IRF2P14316 349 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 MMP9P14780 707 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 ZNF44P15621 663 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 CCL3L1P16619 93 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 USF1P22415 310 aaPredicted RBP2.34□□□□□ -2.03
CSDE1-208ENST00000524652 PRDX2P32119 198 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 PITPNBP48739 271 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 TMBIM6P55061 237 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 DLX6P56179 175 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 KRTAP12-2P59991 146 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 GNB2P62879 340 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 LCN2P80188 198 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 AESQ08117 197 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 MZT1Q08AG7 82 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 ATXN7L3Q14CW9 347 aaPredicted RBP2.34□□□□□ -2.03
CSDE1-208ENST00000524652 RSU1Q15404 277 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 RAB11BQ15907 218 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 MICBQ29980 383 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 C17orf58Q2M2W7 97 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 SMIM21Q3B7S5 101 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 TIMM50Q3ZCQ8 353 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 IDNKQ5T6J7 187 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 RSBN1Q5VWQ0 802 aaPredicted RBP2.34□□□□□ -2.03
CSDE1-208ENST00000524652 IL17RELQ6ZVW7 336 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 Q71RC1 249 aaPredicted RBP2.34□□□□□ -2.03
CSDE1-208ENST00000524652 BTN2A1Q7KYR7 527 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 C6orf201Q7Z4U5 140 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 TPRA1Q86W33 373 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 FAM89BQ8N5H3 189 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 Q8N7P7 452 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 ASCC1Q8N9N2 400 aaKnown RBP2.34□□□□□ -2.03
CSDE1-208ENST00000524652 SUMF2Q8NBJ7 301 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 LY6G5BQ8NDX9 201 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 TMEM185AQ8NFB2 350 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 OR4M1Q8NGD0 313 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 UBALD1Q8TB05 177 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 MRPL30Q8TCC3 161 aaKnown RBP2.34□□□□□ -2.03
CSDE1-208ENST00000524652 RAB2BQ8WUD1 216 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 THRSPQ92748 146 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 RAB1CQ92928 201 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 RBMXL1Q96E39 390 aaKnown RBP2.34□□□□□ -2.03
CSDE1-208ENST00000524652 TIMD4Q96H15 378 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 ARHGAP5-AS1Q96IT6 56 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 DCUN1D5Q9BTE7 237 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 TM2D1Q9BX74 207 aa2.34□□□□□ -2.03
CSDE1-208ENST00000524652 TMEM59Q9BXS4 323 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms