RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	ERGIC3	Q9Y282	383 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	TRAPPC4	Q9Y296	219 aa		3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	LSM5	Q9Y4Y9	91 aa	Known RBP	3.18	□□□□□ -1.9
PCM1-223	ENST00000524356	ATR	Q13535	2644 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	MFNG	O00587	321 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	RP2	O75695	350 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	HAND1	O96004	215 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	IFNA21	P01568	189 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	IGLV3-25	P01717	112 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	GUSB	P08236	651 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	TFPT	P0C1Z6	253 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	ERG	P11308	486 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	CTSE	P14091	401 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	ATF1	P18846	271 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	MYL12A	P19105	171 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	SERPINB1	P30740	379 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	RAB25	P57735	213 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	RPS23	P62266	143 aa	Known RBP	3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	PRDX1	Q06830	199 aa	Known RBP	3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	EDDM3A	Q14507	147 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	TMEM97	Q5BJF2	176 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	TTC32	Q5I0X7	151 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	HIST2H3PS2	Q5TEC6	136 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	C1orf195	Q5TG92	126 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	STEAP4	Q687X5	459 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	KDM4D	Q6B0I6	523 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	LAMTOR1	Q6IAA8	161 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	UGT2A3	Q6UWM9	527 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	IDO2	Q6ZQW0	420 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	FAM183BP	Q6ZVS7	135 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	NOTCH2NL	Q7Z3S9	236 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	COMMD7	Q86VX2	200 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	FAM71E2	Q8N5Q1	922 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	CSNK1G2-AS1	Q8NCQ2	148 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	FDCSP	Q8NFU4	85 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	NEIL3	Q8TAT5	605 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	BLNK	Q8WV28	456 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	ASB17	Q8WXJ9	295 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	IL22RA2	Q969J5	263 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	OLFM3	Q96PB7	478 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	SIGLEC12	Q96PQ1	595 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	SMR3A	Q99954	134 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	CHCHD5	Q9BSY4	110 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	TMED9	Q9BVK6	235 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	DPM3	Q9P2X0	92 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	ZNF629	Q9UEG4	869 aa	Predicted RBP	3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	ENOPH1	Q9UHY7	261 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	HS3ST2	Q9Y278	367 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	ORC6	Q9Y5N6	252 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	CSAG2	Q9Y5P2	127 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	SLC25A15	Q9Y619	301 aa		3.17	□□□□□ -1.9
PCM1-223	ENST00000524356	RBFOX3	A6NFN3	312 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	ZNF729	A6NN14	1252 aa	Predicted RBP	3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	KRTAP16-1	A8MUX0	517 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	C15orf65	H3BRN8	121 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	PLIN3	O60664	434 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	FOXH1	O75593	365 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	DUSP14	O95147	198 aa	Known RBP	3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	MOS	P00540	346 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	NBEAP1	P0C6P0	100 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	GTF2F2	P13984	249 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	CCR7	P32248	378 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	GABRA4	P48169	554 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	ZNF138	P52744	262 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	HPCA	P84074	193 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	CD300C	Q08708	224 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	SMAGP	Q0VAQ4	97 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	ZNF235	Q14590	738 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	ELOC	Q15369	112 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	CCDC58	Q4VC31	144 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	CLEC12A	Q5QGZ9	265 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	FAM71E1	Q6IPT2	247 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	C22orf39	Q6P5X5	142 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	C4orf22	Q6V702	233 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	RASSF6	Q6ZTQ3	369 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	TMEM61	Q8N0U2	210 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	TMEM252	Q8N6L7	170 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	ARIH2OS	Q8N7S6	290 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	TMEM35B	Q8NCS4	154 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	GEMIN6	Q8WXD5	167 aa	Known RBP	3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	RDH5	Q92781	318 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	TMEM159	Q96B96	161 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	RPUSD4	Q96CM3	377 aa	Known RBP	3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	OR2M4	Q96R27	311 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	OR51I1	Q9H343	314 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	FBXL15	Q9H469	300 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	ZNF430	Q9H8G1	570 aa	Predicted RBP	3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	CCL28	Q9NRJ3	127 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	CTSZ	Q9UBR2	303 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	HHLA2	Q9UM44	414 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	NDUFAF1	Q9Y375	327 aa		3.16	□□□□□ -1.9
PCM1-223	ENST00000524356	IGHV3-35	A0A0C4DH35	117 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356		A8MXK9	166 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF878	C9JN71	531 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	NOS1AP	O75052	506 aa	Predicted RBP	3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	REM1	O75628	298 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	TNF	P01375	233 aa		3.15	□□□□□ -1.91
PCM1-223	ENST00000524356	ICAM2	P13598	275 aa		3.15	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms