RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 OR52N1Q8NH53 320 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 NDNFQ8TB73 568 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 NAT14Q8WUY8 206 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 LCN9Q8WX39 176 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 KLK6Q92876 244 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 CCDC124Q96CT7 223 aaKnown RBP2.12□□□□□ -2.07
SKP1-212ENST00000523966 OR52E6Q96RD3 313 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 CGREF1Q99674 301 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 SEC22CQ9BRL7 303 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 MRPL20Q9BYC9 149 aaKnown RBP2.12□□□□□ -2.07
SKP1-212ENST00000523966 UCK1Q9HA47 277 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 C8orf4Q9NR00 106 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 IMP3Q9NV31 184 aaKnown RBP2.12□□□□□ -2.07
SKP1-212ENST00000523966 MS4A12Q9NXJ0 267 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 STX18Q9P2W9 335 aaKnown RBP2.12□□□□□ -2.07
SKP1-212ENST00000523966 SLC23A2Q9UGH3 650 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 VAX2Q9UIW0 290 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 PSMD13Q9UNM6 376 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 SLC7A11Q9UPY5 501 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 POMPQ9Y244 141 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 BTRCQ9Y297 605 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 KLF12Q9Y4X4 402 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 AHCTF1Q8WYP5 2266 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 RIF1Q5UIP0 2472 aaKnown RBP2.12□□□□□ -2.07
SKP1-212ENST00000523966 C5orf42Q9H799 3197 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 CCDC88CQ9P219 2028 aa2.12□□□□□ -2.07
SKP1-212ENST00000523966 CNOT1A5YKK6 2376 aaKnown RBP2.12□□□□□ -2.07
SKP1-212ENST00000523966 MDC1Q14676 2089 aaKnown RBP2.11□□□□□ -2.07
SKP1-212ENST00000523966 PCNX2A6NKB5 2137 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 MUC22E2RYF6 1773 aaPredicted RBP2.11□□□□□ -2.07
SKP1-212ENST00000523966 CDH23Q9H251 3354 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 A0A096LPI6 279 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 FAM240AA0A1B0GVK7 77 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 TMEM72A0PK05 275 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 PRORSD1PA6NEY8 169 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 C2orf74A8MZ97 194 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 E7EQ34 232 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 FXYD1O00168 92 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 RFXANKO14593 260 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 YKT6O15498 198 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 KRT75O95678 551 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 IFNA14P01570 189 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 CDK1P06493 297 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 CRYGCP07315 174 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 IL9P15248 144 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 GPX2P18283 190 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 GNRHRP30968 328 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 HSPA13P48723 471 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 RGS6P49758 472 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 RPS11P62280 158 aaKnown RBP eCLIP2.11□□□□□ -2.07
SKP1-212ENST00000523966 RPL31P62899 125 aaKnown RBP2.11□□□□□ -2.07
SKP1-212ENST00000523966 REEP5Q00765 189 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 FADDQ13158 208 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 TMED1Q13445 227 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 GNA13Q14344 377 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 SP6Q3SY56 376 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 CCSMST1Q4G0I0 132 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 ERICH5Q6P6B1 374 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 MORN3Q6PF18 240 aaPredicted RBP2.11□□□□□ -2.07
SKP1-212ENST00000523966 Q6ZS52 159 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 COMMD6Q7Z4G1 85 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 SPATA24Q86W54 205 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 ASCC1Q8N9N2 400 aaKnown RBP2.11□□□□□ -2.07
SKP1-212ENST00000523966 OR4E2Q8NGC2 313 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 OR52E4Q8NGH9 312 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 OR9I1Q8NGQ6 314 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 OR13C9Q8NGT0 318 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 PHF10Q8WUB8 498 aaKnown RBP2.11□□□□□ -2.07
SKP1-212ENST00000523966 GTF2H4Q92759 462 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 CIDECQ96AQ7 238 aaPredicted RBP2.11□□□□□ -2.07
SKP1-212ENST00000523966 PPCDCQ96CD2 204 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 TEX37Q96LM6 180 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 CCDC115Q96NT0 180 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 PRAP1Q96NZ9 151 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 HBEGFQ99075 208 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 TMED9Q9BVK6 235 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 CHRNA10Q9GZZ6 450 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 Q9H521 79 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 PLEKHF2Q9H8W4 249 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 TAS2R7Q9NYW3 318 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 CD300AQ9UGN4 299 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 TAC3Q9UHF0 121 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 PRO0628Q9UI54 55 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 CHTOPQ9Y3Y2 248 aaKnown RBP2.11□□□□□ -2.07
SKP1-212ENST00000523966 POLR3HQ9Y535 204 aaPredicted RBP2.11□□□□□ -2.07
SKP1-212ENST00000523966 AP4S1Q9Y587 144 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 GMEB1Q9Y692 573 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 SLC22A7Q9Y694 548 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 V9GYY9 64 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 GPR179Q6PRD1 2367 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 EP300Q09472 2414 aaPredicted RBP2.11□□□□□ -2.07
SKP1-212ENST00000523966 PRUNE2Q8WUY3 3088 aa2.11□□□□□ -2.07
SKP1-212ENST00000523966 SNRNP200O75643 2136 aaKnown RBP2.11□□□□□ -2.07
SKP1-212ENST00000523966 THADAQ6YHU6 1953 aa2.1□□□□□ -2.07
SKP1-212ENST00000523966 TECTAO75443 2155 aa2.1□□□□□ -2.07
SKP1-212ENST00000523966 MAP1BP46821 2468 aaKnown RBP2.1□□□□□ -2.07
SKP1-212ENST00000523966 IGKV2-24A0A0C4DH68 120 aa2.1□□□□□ -2.07
SKP1-212ENST00000523966 A0A0J9YY10 115 aa2.1□□□□□ -2.07
SKP1-212ENST00000523966 TCRBV3S1A0A5B6 114 aa2.1□□□□□ -2.07
SKP1-212ENST00000523966 DHRS12A0PJE2 317 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms