RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 IGKV1-16P04430 117 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 AADACP22760 399 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 MC5RP33032 325 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 MECP2P51608 486 aaKnown RBP8.72□□□□□ -1.01
SDCBP-211ENST00000523441 PRR20EP86478 221 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 PRR20CP86479 221 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 PRR20DP86480 221 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 PRR20BP86481 221 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 PRR20AP86496 221 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 EXOSC2Q13868 293 aaKnown RBP8.72□□□□□ -1.01
SDCBP-211ENST00000523441 ATP6AP1Q15904 470 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 DEFB114Q30KQ6 69 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 ZIK1Q3SY52 487 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-211ENST00000523441 XAF1Q6GPH4 301 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 ZNF343Q6P1L6 599 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 SLC16A13Q7RTY0 426 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 OR2K2Q8NGT1 345 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 GPR148Q8TDV2 347 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 PHLDA1Q8WV24 401 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-211ENST00000523441 TSNAXQ99598 290 aaKnown RBP8.72□□□□□ -1.01
SDCBP-211ENST00000523441 TINAGL1Q9GZM7 467 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-211ENST00000523441 CHMP1AQ9HD42 196 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-211ENST00000523441 PIPOXQ9P0Z9 390 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 ABRACLQ9P1F3 81 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 POMPQ9Y244 141 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 H3BUA1 57 aa8.71□□□□□ -1.02
SDCBP-211ENST00000523441 MPPED1O15442 326 aa8.71□□□□□ -1.02
SDCBP-211ENST00000523441 RBBP9O75884 186 aa8.71□□□□□ -1.02
SDCBP-211ENST00000523441 FOLR2P14207 255 aa8.71□□□□□ -1.02
SDCBP-211ENST00000523441 MGMTP16455 207 aa8.71□□□□□ -1.02
SDCBP-211ENST00000523441 FUT3P21217 361 aa8.71□□□□□ -1.02
SDCBP-211ENST00000523441 HTD2P86397 168 aa8.71□□□□□ -1.02
SDCBP-211ENST00000523441 TNFRSF9Q07011 255 aa8.71□□□□□ -1.02
SDCBP-211ENST00000523441 GPR176Q14439 515 aa8.71□□□□□ -1.02
SDCBP-211ENST00000523441 LAX1Q8IWV1 398 aa8.71□□□□□ -1.02
SDCBP-211ENST00000523441 GHSRQ92847 366 aa8.71□□□□□ -1.02
SDCBP-211ENST00000523441 GABARAPL3Q9BY60 117 aa8.71□□□□□ -1.02
SDCBP-211ENST00000523441 GABARAPL1Q9H0R8 117 aa8.71□□□□□ -1.02
SDCBP-211ENST00000523441 MBNL3Q9NUK0 354 aaKnown RBP8.71□□□□□ -1.02
SDCBP-211ENST00000523441 ERVK13-1Q9NX77 482 aa8.71□□□□□ -1.02
SDCBP-211ENST00000523441 EXOGQ9Y2C4 368 aaKnown RBP8.71□□□□□ -1.02
SDCBP-211ENST00000523441 FAM90A23PA8MXZ1 464 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 GYG2O15488 501 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 XRCC3O43542 346 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 SPRY2O43597 315 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 AIREO43918 545 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 NDUFB8O95169 186 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 IGHV3-23P01764 117 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 FASP25445 335 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 SSBP2P81877 361 aaPredicted RBP8.7□□□□□ -1.02
SDCBP-211ENST00000523441 RHOGP84095 191 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 LGALS9CQ6DKI2 356 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 SIGIRRQ6IA17 410 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 GAPTQ8N292 157 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 SYS1Q8N2H4 156 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 FAAP24Q9BTP7 215 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 AKIP1Q9NQ31 210 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 OR1A1Q9P1Q5 309 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 FBXL17Q9UF56 701 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 UBQLN2Q9UHD9 624 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 OAZ3Q9UMX2 235 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 S4R3C0 116 aa8.7□□□□□ -1.02
SDCBP-211ENST00000523441 TRAV8-7A0A075B6U6 113 aa8.69□□□□□ -1.02
SDCBP-211ENST00000523441 MSGN1A6NI15 193 aa8.69□□□□□ -1.02
SDCBP-211ENST00000523441 C2orf70A6NJV1 201 aa8.69□□□□□ -1.02
SDCBP-211ENST00000523441 OR2C1O95371 312 aa8.69□□□□□ -1.02
SDCBP-211ENST00000523441 APOA2P02652 100 aa8.69□□□□□ -1.02
SDCBP-211ENST00000523441 CEACAM6P40199 344 aa8.69□□□□□ -1.02
SDCBP-211ENST00000523441 KIR2DS2P43631 304 aa8.69□□□□□ -1.02
SDCBP-211ENST00000523441 ATP5G2Q06055 141 aa8.69□□□□□ -1.02
SDCBP-211ENST00000523441 FAM71F2Q6NXP2 309 aa8.69□□□□□ -1.02
SDCBP-211ENST00000523441 TMEM61Q8N0U2 210 aa8.69□□□□□ -1.02
SDCBP-211ENST00000523441 ZNF383Q8NA42 475 aa8.69□□□□□ -1.02
SDCBP-211ENST00000523441 OR5AN1Q8NGI8 311 aa8.69□□□□□ -1.02
SDCBP-211ENST00000523441 THRSPQ92748 146 aa8.69□□□□□ -1.02
SDCBP-211ENST00000523441 USMG5Q96IX5 58 aa8.69□□□□□ -1.02
SDCBP-211ENST00000523441 SULT4A1Q9BR01 284 aa8.69□□□□□ -1.02
SDCBP-211ENST00000523441 MUC4Q99102 2169 aa8.69□□□□□ -1.02
SDCBP-211ENST00000523441 ZNF320A2RRD8 509 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 SNTNA6NMZ2 147 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 M0R1X1 148 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 PDCD6O75340 191 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 CA11O75493 328 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 GPX5O75715 221 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 SC5DO75845 299 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 TUSC2O75896 110 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 RPL35AP18077 110 aaKnown RBP8.68□□□□□ -1.02
SDCBP-211ENST00000523441 BMI1P35226 326 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 TAGLNQ01995 201 aaKnown RBP8.68□□□□□ -1.02
SDCBP-211ENST00000523441 HMGN3Q15651 99 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 TNXAQ16473 311 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 TM4SF20Q53R12 229 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 MEDAGQ5VYS4 303 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 C6orf201Q7Z4U5 140 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 ZFP41Q8N8Y5 198 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 OR52I1Q8NGK6 324 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 KCNG3Q8TAE7 436 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 ACOT12Q8WYK0 555 aa8.68□□□□□ -1.02
SDCBP-211ENST00000523441 MYCBPQ99417 103 aaPredicted RBP8.68□□□□□ -1.02
SDCBP-211ENST00000523441 C11orf54Q9H0W9 315 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms