RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 SAA2P0DJI9 122 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 PPIAL4GP0DN37 164 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 DLX1P56177 255 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 ZNF816Q0VGE8 651 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 ODF3L1Q8IXM7 274 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 ZNF295-AS1Q8N0V1 137 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 CLEC18CQ8NCF0 446 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 SSBP3Q9BWW4 388 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 BPESC1Q9GZL8 116 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 MBD2Q9UBB5 411 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 C22orf46C9J442 243 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 F5H0A9 414 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 J3QKU1 62 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 TSC22D2O75157 780 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 IGHV1-8P0DP01 117 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 RPA2P15927 270 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 CXCL2P19875 107 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 DUTP33316 252 aaKnown RBP12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 LPAR6P43657 344 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 PRB3Q04118 309 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 IL15RAQ13261 267 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 ZNF66Q6ZN08 573 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 SLC25A48Q6ZT89 311 aaKnown RBP12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 SPAG16Q8N0X2 631 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 C11orf42Q8N5U0 333 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 RNASE11Q8TAA1 199 aaKnown RBP12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 THAP6Q8TBB0 222 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 FAM216AQ8WUB2 273 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 IL22RA2Q969J5 263 aa12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 HSD17B10Q99714 261 aaKnown RBP12.66□□□□□ -0.38
CTNNA1-236ENST00000522792 FAM208BQ5VWN6 2430 aa12.65□□□□□ -0.38
CTNNA1-236ENST00000522792 A0A0G2JRQ6 117 aa12.65□□□□□ -0.38
CTNNA1-236ENST00000522792 KCNAB3O43448 404 aa12.65□□□□□ -0.38
CTNNA1-236ENST00000522792 EPHA1P21709 976 aa12.65□□□□□ -0.38
CTNNA1-236ENST00000522792 BRWD1-AS2P59051 145 aa12.65□□□□□ -0.38
CTNNA1-236ENST00000522792 IZUMO4Q1ZYL8 232 aa12.65□□□□□ -0.38
CTNNA1-236ENST00000522792 NCR3LG1Q68D85 454 aa12.65□□□□□ -0.38
CTNNA1-236ENST00000522792 AKAP6Q13023 2319 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 H0YIZ8 118 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 RAB29O14966 203 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 VDAC1P21796 283 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 AP2S1P53680 142 aaPredicted RBP12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 ESCO2Q56NI9 601 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 NMSQ5H8A3 153 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 ZNF546Q86UE3 836 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 RAB39BQ96DA2 213 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 OR5AC2Q9NZP5 309 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 ONECUT1Q9UBC0 465 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 LSM5Q9Y4Y9 91 aaKnown RBP12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 DUXBA0A1W2PPF3 345 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 HMSDA8MTL9 139 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 L7N2F9 121 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 S1PR2O95136 353 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 IGKV1-5P01602 117 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 SLC25A4P12235 298 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 PDLIM4P50479 330 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 AKR1C2P52895 323 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 C8orf46Q8TAG6 207 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 DCUN1D4Q92564 292 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 ZNF251Q9BRH9 671 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 RNF126Q9BV68 326 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 SESN1Q9Y6P5 492 aa12.64□□□□□ -0.39
CTNNA1-236ENST00000522792 LRRK2Q5S007 2527 aa12.63□□□□□ -0.39
CTNNA1-236ENST00000522792 A0A1W2PPH5 198 aa12.63□□□□□ -0.39
CTNNA1-236ENST00000522792 NXPH3O95157 252 aa12.63□□□□□ -0.39
CTNNA1-236ENST00000522792 MBPP02686 304 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-236ENST00000522792 ATP5J2P56134 94 aa12.63□□□□□ -0.39
CTNNA1-236ENST00000522792 IFITM2Q01629 132 aa12.63□□□□□ -0.39
CTNNA1-236ENST00000522792 LY6G5BQ8NDX9 201 aa12.63□□□□□ -0.39
CTNNA1-236ENST00000522792 GPR146Q96CH1 333 aa12.63□□□□□ -0.39
CTNNA1-236ENST00000522792 PERPQ96FX8 193 aa12.63□□□□□ -0.39
CTNNA1-236ENST00000522792 TMEM133Q9H2Q1 129 aa12.63□□□□□ -0.39
CTNNA1-236ENST00000522792 GAB2Q9UQC2 676 aa12.63□□□□□ -0.39
CTNNA1-236ENST00000522792 LOC105371242A0A075B767 164 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 FCGR3BO75015 233 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 IGHV2-5P01817 119 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 LIPFP07098 398 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 THOC7Q6I9Y2 204 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 CLDND2Q8NHS1 167 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 RBMXL1Q96E39 390 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 MFFQ9GZY8 342 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 TNFSF18Q9UNG2 199 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 MALRD1Q5VYJ5 2156 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 J3QR06 171 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 G6PCP35575 357 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 PRSS54Q6PEW0 395 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 ABHD12Q8N2K0 398 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 OR4D5Q8NGN0 318 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 OR1S1Q8NH92 325 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 SPIN2AQ99865 258 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 SPIN2BQ9BPZ2 258 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 DOCK11Q5JSL3 2073 aa12.62□□□□□ -0.39
CTNNA1-236ENST00000522792 KRASP01116 189 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 ZFP36P26651 326 aaKnown RBP12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 ARF6P62330 175 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 TMEM65Q6PI78 240 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 OR10X1Q8NGY0 326 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 OR9G1Q8NH87 305 aa12.61□□□□□ -0.39
CTNNA1-236ENST00000522792 RRNAD1Q96FB5 475 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms