RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 UXS1Q8NBZ7 420 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 TNFRSF14Q92956 283 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 TMEM186Q96B77 213 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 TBX15Q96SF7 602 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 UNKLQ9H9P5 680 aaKnown RBP17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 GAB2Q9UQC2 676 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 ANKRD17O75179 2603 aaKnown RBP17.41■□□□□ 0.38
R3HCC1-208ENST00000522012 PROP1O75360 226 aa17.41■□□□□ 0.38
R3HCC1-208ENST00000522012 OR5AC1P0C628 307 aa17.41■□□□□ 0.38
R3HCC1-208ENST00000522012 TMEM249Q2WGJ8 235 aa17.41■□□□□ 0.38
R3HCC1-208ENST00000522012 C1orf229Q6ZS94 237 aaPredicted RBP17.41■□□□□ 0.38
R3HCC1-208ENST00000522012 OR11H6Q8NGC7 330 aa17.41■□□□□ 0.38
R3HCC1-208ENST00000522012 MSI2Q96DH6 328 aaKnown RBP17.41■□□□□ 0.38
R3HCC1-208ENST00000522012 S1PR3Q99500 378 aa17.41■□□□□ 0.38
R3HCC1-208ENST00000522012 PRR13Q9NZ81 148 aa17.41■□□□□ 0.38
R3HCC1-208ENST00000522012 RNF212BA8MTL3 300 aa17.4■□□□□ 0.38
R3HCC1-208ENST00000522012 DUS4LO95620 317 aaKnown RBP17.4■□□□□ 0.38
R3HCC1-208ENST00000522012 IGLV1-47P01700 117 aa17.4■□□□□ 0.38
R3HCC1-208ENST00000522012 ARG1P05089 322 aa17.4■□□□□ 0.38
R3HCC1-208ENST00000522012 IGHV4-31P0DP07 118 aa17.4■□□□□ 0.38
R3HCC1-208ENST00000522012 ANXA3P12429 323 aa17.4■□□□□ 0.38
R3HCC1-208ENST00000522012 HOXB4P17483 251 aaPredicted RBP17.4■□□□□ 0.38
R3HCC1-208ENST00000522012 F2RP25116 425 aa17.4■□□□□ 0.38
R3HCC1-208ENST00000522012 HLA-DRB5Q30154 266 aa17.4■□□□□ 0.38
R3HCC1-208ENST00000522012 NCR3LG1Q68D85 454 aa17.4■□□□□ 0.38
R3HCC1-208ENST00000522012 HCP5Q6MZN7 132 aa17.4■□□□□ 0.38
R3HCC1-208ENST00000522012 KCTD9Q7L273 389 aa17.4■□□□□ 0.38
R3HCC1-208ENST00000522012 DRAXINQ8NBI3 349 aaPredicted RBP17.4■□□□□ 0.38
R3HCC1-208ENST00000522012 BEND2Q8NDZ0 799 aa17.4■□□□□ 0.38
R3HCC1-208ENST00000522012 LHX4Q969G2 390 aa17.4■□□□□ 0.38
R3HCC1-208ENST00000522012 TP53RKQ96S44 253 aa17.4■□□□□ 0.38
R3HCC1-208ENST00000522012 A0A1W2PRD5 423 aa17.39■□□□□ 0.37
R3HCC1-208ENST00000522012 A0A1W2PRF3 423 aa17.39■□□□□ 0.37
R3HCC1-208ENST00000522012 A0A1W2PRM7 423 aa17.39■□□□□ 0.37
R3HCC1-208ENST00000522012 RNASEK-C17orf49H0YIS7 233 aa17.39■□□□□ 0.37
R3HCC1-208ENST00000522012 TGFAP01135 160 aa17.39■□□□□ 0.37
R3HCC1-208ENST00000522012 IL3RAP26951 378 aa17.39■□□□□ 0.37
R3HCC1-208ENST00000522012 BCAP31P51572 246 aa17.39■□□□□ 0.37
R3HCC1-208ENST00000522012 EIF4EBP1Q13541 118 aaPredicted RBP17.39■□□□□ 0.37
R3HCC1-208ENST00000522012 ZNF66Q6ZN08 573 aa17.39■□□□□ 0.37
R3HCC1-208ENST00000522012 C12orf45Q8N5I9 185 aaPredicted RBP17.39■□□□□ 0.37
R3HCC1-208ENST00000522012 TCTEX1D2Q8WW35 142 aa17.39■□□□□ 0.37
R3HCC1-208ENST00000522012 HSD17B10Q99714 261 aaKnown RBP17.39■□□□□ 0.37
R3HCC1-208ENST00000522012 ZNF251Q9BRH9 671 aa17.39■□□□□ 0.37
R3HCC1-208ENST00000522012 MED28Q9H204 178 aa17.39■□□□□ 0.37
R3HCC1-208ENST00000522012 AUP1Q9Y679 476 aa17.39■□□□□ 0.37
R3HCC1-208ENST00000522012 GZMKP49863 264 aa17.38■□□□□ 0.37
R3HCC1-208ENST00000522012 LINC00205P59089 165 aa17.38■□□□□ 0.37
R3HCC1-208ENST00000522012 RPL30P62888 115 aaKnown RBP17.38■□□□□ 0.37
R3HCC1-208ENST00000522012 CATR1Q13166 79 aa17.38■□□□□ 0.37
R3HCC1-208ENST00000522012 LIN54Q6MZP7 749 aa17.38■□□□□ 0.37
R3HCC1-208ENST00000522012 MITD1Q8WV92 249 aa17.38■□□□□ 0.37
R3HCC1-208ENST00000522012 GALNT14Q96FL9 552 aa17.38■□□□□ 0.37
R3HCC1-208ENST00000522012 PHB2Q99623 299 aa17.38■□□□□ 0.37
R3HCC1-208ENST00000522012 C7orf69Q9H7B7 122 aa17.38■□□□□ 0.37
R3HCC1-208ENST00000522012 AMMECR1Q9Y4X0 333 aaPredicted RBP17.38■□□□□ 0.37
R3HCC1-208ENST00000522012 YLPM1P49750 1951 aaKnown RBP17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 BUB1B-PAK6H3BSN5 160 aa17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 SMAD7O15105 426 aaKnown RBP17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 GATA3P23771 443 aa17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 DUTP33316 252 aaKnown RBP17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 ANKRD55Q3KP44 614 aa17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 ZNF833PQ6ZTB9 187 aa17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 CIARTQ8N365 385 aaPredicted RBP17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 OR4P4Q8NGL7 312 aa17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 COQ8AQ8NI60 647 aa17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 LIN7CQ9NUP9 197 aaKnown RBP17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 LINC00473A8K010 186 aa17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 H0Y980 276 aa17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 REG1BP48304 166 aa17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 RRAS2P62070 204 aaPredicted RBP17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 TMEM187Q14656 261 aa17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 OR2B11Q5JQS5 317 aa17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 GLYATL2Q8WU03 294 aa17.37■□□□□ 0.37
R3HCC1-208ENST00000522012 ARHGAP32A7KAX9 2087 aa17.36■□□□□ 0.37
R3HCC1-208ENST00000522012 DIAPH2-AS1Q14236 149 aa17.36■□□□□ 0.37
R3HCC1-208ENST00000522012 CYB5R2Q6BCY4 276 aa17.36■□□□□ 0.37
R3HCC1-208ENST00000522012 ST6GALNAC6Q969X2 333 aa17.36■□□□□ 0.37
R3HCC1-208ENST00000522012 TMEM222Q9H0R3 208 aa17.36■□□□□ 0.37
R3HCC1-208ENST00000522012 CSMD1Q96PZ7 3565 aa17.35■□□□□ 0.37
R3HCC1-208ENST00000522012 DOCK11Q5JSL3 2073 aa17.35■□□□□ 0.37
R3HCC1-208ENST00000522012 HMX3A6NHT5 357 aa17.35■□□□□ 0.37
R3HCC1-208ENST00000522012 ODF3BA8MYP8 253 aa17.35■□□□□ 0.37
R3HCC1-208ENST00000522012 B3GALNT1O75752 331 aa17.35■□□□□ 0.37
R3HCC1-208ENST00000522012 SERPINE2P07093 398 aa17.35■□□□□ 0.37
R3HCC1-208ENST00000522012 HTR1DP28221 377 aa17.35■□□□□ 0.37
R3HCC1-208ENST00000522012 THBS3P49746 956 aa17.35■□□□□ 0.37
R3HCC1-208ENST00000522012 UBE2E1P51965 193 aa17.35■□□□□ 0.37
R3HCC1-208ENST00000522012 ZNF137PP52743 207 aa17.35■□□□□ 0.37
R3HCC1-208ENST00000522012 FCN2Q15485 313 aa17.35■□□□□ 0.37
R3HCC1-208ENST00000522012 LIAT1Q6ZQX7 453 aa17.35■□□□□ 0.37
R3HCC1-208ENST00000522012 CT45A6P0DMU7 189 aa17.34■□□□□ 0.37
R3HCC1-208ENST00000522012 CT45A5P0DMU8 189 aa17.34■□□□□ 0.37
R3HCC1-208ENST00000522012 CT45A7P0DMV0 189 aa17.34■□□□□ 0.37
R3HCC1-208ENST00000522012 LGALS4P56470 323 aa17.34■□□□□ 0.37
R3HCC1-208ENST00000522012 FAM71F2Q6NXP2 309 aa17.34■□□□□ 0.37
R3HCC1-208ENST00000522012 TGIF2LXQ8IUE1 241 aa17.34■□□□□ 0.37
R3HCC1-208ENST00000522012 SPAG16Q8N0X2 631 aa17.34■□□□□ 0.37
R3HCC1-208ENST00000522012 LGI3Q8N145 548 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms