RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 PLEKHJ1Q9NW61 149 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 TREM2Q9NZC2 230 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 ZNF581Q9P0T4 197 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 ELF5Q9UKW6 265 aaPredicted RBP3.12□□□□□ -1.91
CLK4-207ENST00000520909 IGHV3OR15-7A0A075B7D8 119 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 LRRC30A6NM36 301 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 FOXI3A8MTJ6 420 aaPredicted RBP3.11□□□□□ -1.91
CLK4-207ENST00000520909 H7C417 338 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 SIRPB1O00241 398 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 SULT1C2O00338 296 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 MFNGO00587 321 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 SH2D1BO14796 132 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 PLA2G10O15496 165 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 ORC5O43913 435 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 SSX5O60225 188 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 NOS1APO75052 506 aaPredicted RBP3.11□□□□□ -1.91
CLK4-207ENST00000520909 PDCD6O75340 191 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 UBR5O95071 2799 aaPredicted RBP3.11□□□□□ -1.91
CLK4-207ENST00000520909 MT-ND4P03905 459 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 CD55P08174 381 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 MELTFP08582 738 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 IRF2P14316 349 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 ZNF44P15621 663 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 HIST1H1DP16402 221 aaKnown RBP3.11□□□□□ -1.91
CLK4-207ENST00000520909 GLRA1P23415 457 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 ZBTB25P24278 435 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 CD80P33681 288 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 CBX5P45973 191 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 GABRA2P47869 451 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 AP3S2P59780 193 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 MRPS15P82914 257 aaKnown RBP3.11□□□□□ -1.91
CLK4-207ENST00000520909 ASAH1Q13510 395 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 ARL6IP1Q15041 203 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 MPV17LQ2QL34 196 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 TRIM16LQ309B1 348 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 SMIM21Q3B7S5 101 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 NHLRC3Q5JS37 347 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 AGAP6Q5VW22 663 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 HACD4Q5VWC8 232 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 MZT2BQ6NZ67 158 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 WDR82Q6UXN9 313 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 ACP7Q6ZNF0 438 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 Q6ZVH6 145 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 GDPD3Q7L5L3 318 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 CENPSQ8N2Z9 138 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 MUC15Q8N387 334 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 BPIFB2Q8N4F0 458 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 TOMM5Q8N4H5 51 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 DEFB108BQ8NET1 73 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 Q8NFD4 153 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 OR5T2Q8NGG2 359 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 OR10Z1Q8NGY1 313 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 NEK7Q8TDX7 302 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 GPX8Q8TED1 209 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 CCL17Q92583 94 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 RDH5Q92781 318 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 SEH1LQ96EE3 360 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 LINC00167Q96N53 147 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 SULT4A1Q9BR01 284 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 NUDT16L1Q9BRJ7 211 aaKnown RBP3.11□□□□□ -1.91
CLK4-207ENST00000520909 HDHD3Q9BSH5 251 aaPredicted RBP3.11□□□□□ -1.91
CLK4-207ENST00000520909 ST6GALNAC5Q9BVH7 336 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 RHOFQ9HBH0 211 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 CHMP1AQ9HD42 196 aaPredicted RBP3.11□□□□□ -1.91
CLK4-207ENST00000520909 IFT46Q9NQC8 304 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 FAIMQ9NVQ4 179 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 RASL12Q9NYN1 266 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 KLK11Q9UBX7 282 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 MTFP1Q9UDX5 166 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 IL19Q9UHD0 177 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 GLS2Q9UI32 602 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 AK3Q9UIJ7 227 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 TBC1D24Q9ULP9 559 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 WIPI2Q9Y4P8 454 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 SESN1Q9Y6P5 492 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 LRBAP50851 2863 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 SPG11Q96JI7 2443 aa3.11□□□□□ -1.91
CLK4-207ENST00000520909 USF3Q68DE3 2245 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 CACNA1DQ01668 2161 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 HCFC1P51610 2035 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 UTP20O75691 2785 aaKnown RBP3.1□□□□□ -1.91
CLK4-207ENST00000520909 FLNBO75369 2602 aaKnown RBP3.1□□□□□ -1.91
CLK4-207ENST00000520909 TRAV24A0A0B4J272 114 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 FAM240BA0A1B0GVZ2 78 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 ANKRD20A5PA0PJZ0 165 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 RFPL4AA6NLU0 287 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 OR2AT4A6NND4 320 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 CENPXA8MT69 81 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 SERPINE3A8MV23 424 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 ZNF736B4DX44 427 aaPredicted RBP3.1□□□□□ -1.91
CLK4-207ENST00000520909 MCRIP1C9JLW8 97 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 RFPL4AL1F8VTS6 287 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 LYNX1G3V0Z9 82 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 J3QKU1 62 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 LYRM1O43325 122 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 CA11O75493 328 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 OR2C1O95371 312 aa3.1□□□□□ -1.91
CLK4-207ENST00000520909 PTBP3O95758 552 aaKnown RBP3.1□□□□□ -1.91
CLK4-207ENST00000520909 ECDO95905 644 aaPredicted RBP3.1□□□□□ -1.91
CLK4-207ENST00000520909 OR2H2O95918 312 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms