RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 TCTEX1D2Q8WW35 142 aa7.3□□□□□ -1.24
CSMD1-208ENST00000520561 LHX4Q969G2 390 aa7.3□□□□□ -1.24
CSMD1-208ENST00000520561 MSI2Q96DH6 328 aaKnown RBP7.3□□□□□ -1.24
CSMD1-208ENST00000520561 ADTRPQ96IZ2 230 aa7.3□□□□□ -1.24
CSMD1-208ENST00000520561 TBX15Q96SF7 602 aa7.3□□□□□ -1.24
CSMD1-208ENST00000520561 PHB2Q99623 299 aa7.3□□□□□ -1.24
CSMD1-208ENST00000520561 ZNRD1Q9P1U0 126 aa7.3□□□□□ -1.24
CSMD1-208ENST00000520561 GAB2Q9UQC2 676 aa7.3□□□□□ -1.24
CSMD1-208ENST00000520561 POLQO75417 2590 aa7.3□□□□□ -1.24
CSMD1-208ENST00000520561 UNC79Q9P2D8 2635 aa7.3□□□□□ -1.24
CSMD1-208ENST00000520561 YLPM1P49750 1951 aaKnown RBP7.29□□□□□ -1.24
CSMD1-208ENST00000520561 HECTD1Q9ULT8 2610 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 A0A0A6YYJ9 748 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 PIGBOS1A0A0B4J2F0 54 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 C3orf85A0A1B0GTC6 90 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 C9orf170A2RU37 121 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 ODF3BA8MYP8 253 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 H0Y980 276 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 RNASEK-C17orf49H0YIS7 233 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 BUB1B-PAK6H3BSN5 160 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 SMAD7O15105 426 aaKnown RBP7.29□□□□□ -1.24
CSMD1-208ENST00000520561 TXNL1O43396 289 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 DUS4LO95620 317 aaKnown RBP7.29□□□□□ -1.24
CSMD1-208ENST00000520561 IGLV1-47P01700 117 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 APOA2P02652 100 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 OR5AC1P0C628 307 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 F2RP25116 425 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 HTR1DP28221 377 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 UBE2E1P51965 193 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 ZNF137PP52743 207 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 DHODHQ02127 395 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 GPR157Q5UAW9 335 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 HCP5Q6MZN7 132 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 ZNF833PQ6ZTB9 187 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 TGIF2LXQ8IUE1 241 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 ODF3L1Q8IXM7 274 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 PDZD9Q8IXQ8 264 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 OR4P4Q8NGL7 312 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 RPEQ96AT9 228 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 GALNT14Q96FL9 552 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 C5orf30Q96GV9 206 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 OR51J1Q9H342 316 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 C7orf69Q9H7B7 122 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 PRELID3BQ9Y3B1 194 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 TBL2Q9Y4P3 447 aaKnown RBP7.29□□□□□ -1.24
CSMD1-208ENST00000520561 ABCA2Q9BZC7 2435 aa7.29□□□□□ -1.24
CSMD1-208ENST00000520561 PRRC2AP48634 2157 aaKnown RBP7.29□□□□□ -1.24
CSMD1-208ENST00000520561 TRAV40A0A0B4J280 105 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 A0A1B0GVG6 124 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 A0A1W2PRD5 423 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 A0A1W2PRF3 423 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 A0A1W2PRM7 423 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 LEUTXA8MZ59 168 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 SERPINE2P07093 398 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 EPHA1P21709 976 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 DUTP33316 252 aaKnown RBP7.28□□□□□ -1.24
CSMD1-208ENST00000520561 KIR2DS2P43631 304 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 SUPT4H1P63272 117 aaKnown RBP7.28□□□□□ -1.24
CSMD1-208ENST00000520561 EIF4EBP1Q13541 118 aaPredicted RBP7.28□□□□□ -1.24
CSMD1-208ENST00000520561 OR2B11Q5JQS5 317 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 TPTE2P1Q5T6R2 138 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 MINOS1Q5TGZ0 78 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 LGI3Q8N145 548 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 C12orf45Q8N5I9 185 aaPredicted RBP7.28□□□□□ -1.24
CSMD1-208ENST00000520561 TCTEX1D1Q8N7M0 179 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 UXS1Q8NBZ7 420 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 CD300LFQ8TDQ1 290 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 MITD1Q8WV92 249 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 TP53RKQ96S44 253 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 GPHA2Q96T91 129 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 MRPL20Q9BYC9 149 aaKnown RBP7.28□□□□□ -1.24
CSMD1-208ENST00000520561 MED28Q9H204 178 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 DPM3Q9P2X0 92 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 MINOS1-NBL1R4GNA1 71 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 CR1P17927 2039 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 LRBAP50851 2863 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 DCHS2Q6V1P9 2916 aa7.28□□□□□ -1.24
CSMD1-208ENST00000520561 A0A0B4J2A0 478 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 OOSP1A8MZH6 123 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 NPFFO15130 113 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 FCGR3BO75015 233 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 GAPDHP04406 335 aaKnown RBP7.27□□□□□ -1.25
CSMD1-208ENST00000520561 UCP1P25874 307 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 REG1BP48304 166 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 RAB13P51153 203 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 BCAP31P51572 246 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 ARHGDIBP52566 201 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 RPL30P62888 115 aaKnown RBP7.27□□□□□ -1.25
CSMD1-208ENST00000520561 TAGLNQ01995 201 aaKnown RBP7.27□□□□□ -1.25
CSMD1-208ENST00000520561 ZNF816Q0VGE8 651 aaPredicted RBP7.27□□□□□ -1.25
CSMD1-208ENST00000520561 TMEM187Q14656 261 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 RTL8BQ17RB0 113 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 SP6Q3SY56 376 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 MIDNQ504T8 468 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 CCDC144NLQ6NUI1 221 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 LIAT1Q6ZQX7 453 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 ZNF695Q8IW36 515 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 SPAG16Q8N0X2 631 aa7.27□□□□□ -1.25
CSMD1-208ENST00000520561 CIARTQ8N365 385 aaPredicted RBP7.27□□□□□ -1.25
CSMD1-208ENST00000520561 TEX29Q8N6K0 151 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms