RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 MFSD8Q8NHS3 518 aa2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 EEF1AKMT1Q8WVE0 214 aa2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 CCDC94Q9BW85 323 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 C3orf18Q9UK00 162 aa2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 DKKL1Q9UK85 242 aa2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 PTPRJQ12913 1337 aa2.64□□□□□ -1.99
HMGB1P46-201ENST00000520062 IGLV10-54A0A075B6I4 117 aa2.63□□□□□ -1.99
HMGB1P46-201ENST00000520062 LOC102725191A0A1B0GVB3 256 aa2.63□□□□□ -1.99
HMGB1P46-201ENST00000520062 GSTZ1O43708 216 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P46-201ENST00000520062 S100A6P06703 90 aa2.63□□□□□ -1.99
HMGB1P46-201ENST00000520062 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
HMGB1P46-201ENST00000520062 TSPEAR-AS2P59090 65 aa2.63□□□□□ -1.99
HMGB1P46-201ENST00000520062 TAS2R45P59539 299 aa2.63□□□□□ -1.99
HMGB1P46-201ENST00000520062 CLVS2Q5SYC1 327 aa2.63□□□□□ -1.99
HMGB1P46-201ENST00000520062 TMPPEQ6ZT21 453 aa2.63□□□□□ -1.99
HMGB1P46-201ENST00000520062 TMEM161BQ8NDZ6 487 aa2.63□□□□□ -1.99
HMGB1P46-201ENST00000520062 OR8J2Q8NGG1 315 aa2.63□□□□□ -1.99
HMGB1P46-201ENST00000520062 OPTNQ96CV9 577 aa2.63□□□□□ -1.99
HMGB1P46-201ENST00000520062 C11orf1Q9H5F2 150 aa2.63□□□□□ -1.99
HMGB1P46-201ENST00000520062 NACADO15069 1562 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 COL18A1P39060 1754 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 TGOLN2O43493 480 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 DCTN3O75935 186 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 IFNA5P01569 189 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 IGKV4-1P06312 121 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 NPPCP23582 126 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 NKX2-5P52952 324 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 BTN3A2P78410 334 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 HOXC5Q00444 222 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 JOSD1Q15040 202 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 IMPG1Q17R60 797 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 HCP5Q6MZN7 132 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 SLC51BQ86UW2 128 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 COMMD7Q86VX2 200 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 OR10D4PQ8NGN7 298 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 LMX1AQ8TE12 382 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 TMA16Q96EY4 203 aaKnown RBP2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 ANKRD36BP1Q96IX9 119 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 SLC35G5Q96KT7 338 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 MND1Q9BWT6 205 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 MRPS26Q9BYN8 205 aaKnown RBP2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 HRASLSQ9HDD0 168 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 MRPL16Q9NX20 251 aaKnown RBP2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 HEY1Q9Y5J3 304 aa2.62□□□□□ -1.99
HMGB1P46-201ENST00000520062 PRR14LQ5THK1 2151 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 CHD2O14647 1828 aaKnown RBP2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 ZCCHC6Q5VYS8 1495 aaKnown RBP2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 C17orf98A8MV24 154 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 G3V3Q6 166 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 M0R036 132 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 M0R381 172 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 ESDP10768 282 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 SLC25A16P16260 332 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 CD36P16671 472 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 LGALS3P17931 250 aaKnown RBP2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 RPS12P25398 132 aaKnown RBP2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 TMEM33P57088 247 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 ZNF117Q03924 483 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 HTR4Q13639 388 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 UAP1Q16222 522 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 FAM78BQ5VT40 261 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 RASSF6Q6ZTQ3 369 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 DCXRQ7Z4W1 244 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 OR11H1Q8NG94 326 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 GPR32P1Q8NGA4 272 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 FNDC9Q8TBE3 224 aa2.61□□□□□ -1.99
HMGB1P46-201ENST00000520062 LTBP4Q8N2S1 1624 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 PLCH2O75038 1416 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 PLB1Q6P1J6 1458 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 ADAMTSL1Q8N6G6 1762 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 SLC17A3O00476 420 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 CALB1P05937 261 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 LPAR6P43657 344 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 CTBP2P56545 445 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 MYL6P60660 151 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 BATFQ16520 125 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 PLPPR5Q32ZL2 321 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 RASL11AQ6T310 242 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 C1orf174Q8IYL3 243 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 OR10A6Q8NH74 314 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 MGLLQ99685 303 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 TMEM109Q9BVC6 243 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 PARD6GQ9BYG4 376 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 OR51I2Q9H344 312 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 ZSWIM8A7E2V4 1837 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 SHANK1Q9Y566 2161 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 BRD4O60885 1362 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 THSD7AQ9UPZ6 1657 aa2.6□□□□□ -1.99
HMGB1P46-201ENST00000520062 ATAD5Q96QE3 1844 aa2.59□□□□□ -1.99
HMGB1P46-201ENST00000520062 GRIFINA4D1Z8 144 aa2.59□□□□□ -1.99
HMGB1P46-201ENST00000520062 E7EQL1 145 aa2.59□□□□□ -1.99
HMGB1P46-201ENST00000520062 LY6HO94772 140 aa2.59□□□□□ -1.99
HMGB1P46-201ENST00000520062 SERPINA6P08185 405 aa2.59□□□□□ -1.99
HMGB1P46-201ENST00000520062 CTSGP08311 255 aa2.59□□□□□ -1.99
HMGB1P46-201ENST00000520062 ITGB3BPQ13352 177 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P46-201ENST00000520062 C1orf195Q5TG92 126 aa2.59□□□□□ -1.99
HMGB1P46-201ENST00000520062 CCDC121Q6ZUS5 278 aa2.59□□□□□ -1.99
HMGB1P46-201ENST00000520062 BAP18Q8IXM2 172 aa2.59□□□□□ -1.99
HMGB1P46-201ENST00000520062 UBL4BQ8N7F7 174 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms