RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 TNFRSF19Q9NS68 423 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 H3BUT2 72 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 CELA2BP08218 269 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-206ENST00000520002 PRICKLE4Q2TBC4 344 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 OR4S2Q8NH73 311 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 LY75O60449 1722 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 TNFAIP6P98066 277 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-206ENST00000520002 FRRS1LQ9P0K9 344 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 SIRT4Q9Y6E7 314 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-206ENST00000520002 EFNB1P98172 346 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 ZNF770Q6IQ21 691 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-206ENST00000520002 NRTNQ99748 197 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 JKAMPQ9P055 326 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 OR2T8A6NH00 312 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 TPTE2P1Q5T6R2 138 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 OR5R1Q8NH85 324 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 ACP1P24666 158 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 H1FOOQ8IZA3 346 aaPredicted RBP7.6□□□□□ -1.19
CSMD1-206ENST00000520002 TMEM167BQ9NRX6 74 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 K7EQS6 105 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 TMEM91Q6ZNR0 172 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 OR8B2Q96RD0 313 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 GTSF1LQ9H1H1 148 aa7.6□□□□□ -1.19
CSMD1-206ENST00000520002 TRAV17A0A0B4J275 112 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 TWIST1Q15672 202 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 DPRXA6NFQ7 191 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 GCM2O75603 506 aaPredicted RBP7.59□□□□□ -1.19
CSMD1-206ENST00000520002 CXCL10P02778 98 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 HSPB1P04792 205 aaKnown RBP7.59□□□□□ -1.19
CSMD1-206ENST00000520002 ZNF260Q3ZCT1 412 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 SRSF5Q13243 272 aaKnown RBP7.59□□□□□ -1.19
CSMD1-206ENST00000520002 SPINK14Q6IE38 97 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 LSM10Q969L4 123 aaKnown RBP7.59□□□□□ -1.19
CSMD1-206ENST00000520002 OGG1O15527 345 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 GALNT14Q96FL9 552 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 ANXA10Q9UJ72 324 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 AUP1Q9Y679 476 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 TSPAN2O60636 221 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 LEPROTL1O95214 131 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 SRSF3P84103 164 aaKnown RBP7.59□□□□□ -1.19
CSMD1-206ENST00000520002 CD300LDQ6UXZ3 194 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 IL36RNQ9UBH0 155 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 COL5A3P25940 1745 aaPredicted RBP7.59□□□□□ -1.19
CSMD1-206ENST00000520002 TMPRSS2O15393 492 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 GAPDHP04406 335 aaKnown RBP7.59□□□□□ -1.19
CSMD1-206ENST00000520002 CT62P0C5K7 136 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 GAB4Q2WGN9 574 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 ANKRD55Q3KP44 614 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 FOXC2Q99958 501 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 STAG3L3P0CL85 134 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 NUTF2P61970 127 aaKnown RBP7.59□□□□□ -1.19
CSMD1-206ENST00000520002 FOXC1Q12948 553 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 KRTCAP3Q53RY4 240 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 TMEM38BQ9NVV0 291 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 TNXAQ16473 311 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 RFLNBQ8N5W9 214 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 TEX29Q8N6K0 151 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 SCN10AQ9Y5Y9 1956 aa7.59□□□□□ -1.19
CSMD1-206ENST00000520002 CDX4O14627 284 aaPredicted RBP7.59□□□□□ -1.2
CSMD1-206ENST00000520002 CBLN3Q6UW01 205 aa7.59□□□□□ -1.2
CSMD1-206ENST00000520002 SFTPA1Q8IWL2 248 aa7.59□□□□□ -1.2
CSMD1-206ENST00000520002 CARHSP1Q9Y2V2 147 aaKnown RBP7.59□□□□□ -1.2
CSMD1-206ENST00000520002 IMMP2LQ96T52 175 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 LAMTOR2Q9Y2Q5 125 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 RBPMS2Q6ZRY4 209 aaKnown RBP7.58□□□□□ -1.2
CSMD1-206ENST00000520002 NAA38Q9BRA0 125 aaKnown RBP7.58□□□□□ -1.2
CSMD1-206ENST00000520002 hADV38S2A0JD32 116 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 UBE2CO00762 179 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 HKR1P10072 659 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 PMELP40967 661 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 SFTA2Q6UW10 78 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 OR5A1Q8NGJ0 315 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 GRAMD2BQ96HH9 432 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 KCNMB2Q9Y691 235 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 C9orf50Q5SZB4 431 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 PQLC2Q6ZP29 291 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 PPIAL4DF5H284 164 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 OR4D11Q8NGI4 311 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 PLA2G2FQ9BZM2 168 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 WDR54Q9H977 334 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 TNRC6AQ8NDV7 1962 aaKnown RBP7.58□□□□□ -1.2
CSMD1-206ENST00000520002 TRAV38-1A0A0B4J264 116 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 FAM19A2Q8N3H0 131 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 ASCL3Q9NQ33 180 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 THYN1Q9P016 225 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 Q8WTZ3 238 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 PMCHL2Q9BQD1 86 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 ISG15P05161 165 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 MAFAQ8NHW3 353 aaPredicted RBP7.58□□□□□ -1.2
CSMD1-206ENST00000520002 DMRTA2Q96SC8 542 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 NAV3Q8IVL0 2385 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 A0A1B0GW15 77 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 AMMECR1Q9Y4X0 333 aaPredicted RBP7.58□□□□□ -1.2
CSMD1-206ENST00000520002 R4GN57 208 aa7.58□□□□□ -1.2
CSMD1-206ENST00000520002 FCGR3AP08637 254 aa7.57□□□□□ -1.2
CSMD1-206ENST00000520002 HIKESHIQ53FT3 197 aa7.57□□□□□ -1.2
CSMD1-206ENST00000520002 C1QL3Q5VWW1 255 aa7.57□□□□□ -1.2
CSMD1-206ENST00000520002 HLA-DQA1P01909 254 aa7.57□□□□□ -1.2
CSMD1-206ENST00000520002 PIGYQ3MUY2 71 aa7.57□□□□□ -1.2
CSMD1-206ENST00000520002 GABRG3Q99928 467 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms