RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 CXorf21Q9HAI6 301 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 SLCO1B3Q9NPD5 702 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 SIRT7Q9NRC8 400 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 VAPAQ9P0L0 249 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 F11RQ9Y624 299 aaKnown RBP3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 KIF25-AS1Q9Y6Z4 181 aa3.21□□□□□ -1.9
HMGB1P23-201ENST00000518743 LRP1BQ9NZR2 4599 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 CEACAM18A8MTB9 384 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 M0R2N4 97 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 RTL8CO15255 209 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 GMDSO60547 372 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 SUPT3HO75486 399 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 SEMA3DO95025 777 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 GAS8-AS1O95177 125 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 MOSP00540 346 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 UCHL3P15374 230 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 CTRLP40313 264 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 CRATP43155 626 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 PPICP45877 212 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 TTPAP49638 278 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 SYNJ2BPP57105 145 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 KLF3P57682 345 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 DSTNP60981 165 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 RPL18AQ02543 176 aaKnown RBP3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 GPR176Q14439 515 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 POU2AF1Q16633 256 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 KRT71Q3SY84 523 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 TMEM155Q4W5P6 130 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 ERICH5Q6P6B1 374 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 ARL9Q6T311 187 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 LYPD2Q6UXB3 125 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 CYHR1Q6ZMK1 362 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 SGPP2Q8IWX5 399 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 TTLQ8NG68 377 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR8B3Q8NGG8 313 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 LGALS14Q8TCE9 139 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 RGP1Q92546 391 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 HAUS1Q96CS2 278 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 SCGB3A2Q96PL1 93 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR8B2Q96RD0 313 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 NAA50Q9GZZ1 169 aaKnown RBP3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 REEP1Q9H902 201 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 TREX1Q9NSU2 369 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 CD300AQ9UGN4 299 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 CES1P1Q9UKY3 287 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 HYOU1Q9Y4L1 999 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 AGRNO00468 2067 aa3.2□□□□□ -1.9
HMGB1P23-201ENST00000518743 GPR171O14626 319 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 SLC16A7O60669 478 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 ENTPD5O75356 428 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 TTC4O95801 387 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 GCGP01275 180 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 CD3GP09693 182 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 SLC35E2BP0CK96 405 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 GLRXP35754 106 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 MYCNOSP40205 109 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 SERPINB8P50452 374 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 VSNL1P62760 191 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 DAZ2Q13117 558 aaKnown RBP3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 ERCC8Q13216 396 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 PNOCQ13519 176 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 IL34Q6ZMJ4 242 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 LRRC6Q86X45 466 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 STPG2Q8N412 459 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR11H7Q8NGC8 314 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR52R1Q8NGF1 315 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 LRRC29Q8WV35 223 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 TMEM239Q8WW34 195 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 BAALCQ8WXS3 180 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 CDKL2Q92772 493 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 SGTBQ96EQ0 304 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 OLFM3Q96PB7 478 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 RNF157Q96PX1 679 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 TSPAN32Q96QS1 320 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 VAT1Q99536 393 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 HINT2Q9BX68 163 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 CDCA4Q9BXL8 241 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 KRTAP2-2Q9BYT5 123 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 OR51B6Q9H340 312 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 TREM1Q9NP99 234 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 RPS10P5Q9NQ39 176 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 DAZ3Q9NR90 486 aaKnown RBP3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 MS4A12Q9NXJ0 267 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 TP53TG3Q9ULZ0 132 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 RBMX2Q9Y388 322 aaKnown RBP3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 LRP2P98164 4655 aa3.19□□□□□ -1.9
HMGB1P23-201ENST00000518743 FAT1Q14517 4588 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 IGLV1-36A0A0B4J1U3 117 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 IGHV3-66A0A0C4DH42 116 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 ANKRD20A5PA0PJZ0 165 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 PLAC8L1A1L4L8 177 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 ERI2A8K979 691 aaKnown RBP3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 H3BSH0 61 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 GABRPO00591 440 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 GABARAPO95166 117 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 EIF4EP06730 217 aaKnown RBP3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 PGA5P0DJD9 388 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 RBM34P42696 430 aaKnown RBP3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 CXCL5P42830 114 aa3.18□□□□□ -1.9
HMGB1P23-201ENST00000518743 CSNK1A1P48729 337 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms