RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 CLN6Q9NWW5 311 aa2.14□□□□□ -2.07
CPNE3-204ENST00000517862 LINC00527Q9UJ94 153 aa2.14□□□□□ -2.07
CPNE3-204ENST00000517862 SAR1BQ9Y6B6 198 aa2.14□□□□□ -2.07
CPNE3-204ENST00000517862 MDN1Q9NU22 5596 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 DEFB131BA0A096LNP1 70 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 A0A1B0GW15 77 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 ZFP92A6NM28 416 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 KRTAP4-16G5E9R7 235 aaPredicted RBP2.13□□□□□ -2.07
CPNE3-204ENST00000517862 K7EN84 100 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 MFSD11O43934 449 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 FADS1O60427 444 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 TTC4O95801 387 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 CD7P09564 240 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 PGA5P0DJD9 388 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 CT45A6P0DMU7 189 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 CT45A5P0DMU8 189 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 CT45A7P0DMV0 189 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 TCP1P17987 556 aaKnown RBP2.13□□□□□ -2.07
CPNE3-204ENST00000517862 RAB4AP20338 218 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 CASP1P29466 404 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 PPICP45877 212 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 MEOX2P50222 304 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 RPL37AP61513 92 aaKnown RBP2.13□□□□□ -2.07
CPNE3-204ENST00000517862 TFDP2Q14188 446 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 CLINT1Q14677 625 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 FCN2Q15485 313 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 LRRC10Q5BKY1 277 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 CT45A1Q5HYN5 189 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 FAM201AQ5SY85 155 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 CCDC122Q5T0U0 273 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 TPTE2P1Q5T6R2 138 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 ZNF621Q6ZSS3 439 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 TMPPEQ6ZT21 453 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 PID1Q7Z2X4 250 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 WDR86Q86TI4 376 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 SELENOHQ8IZQ5 122 aaKnown RBP2.13□□□□□ -2.07
CPNE3-204ENST00000517862 DYNAPQ8N1N2 210 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 MREGQ8N565 214 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 ZNF561Q8N587 486 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 DUSP18Q8NEJ0 188 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 OR7G1Q8NGA0 311 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 OR4M1Q8NGD0 313 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 CT45A3Q8NHU0 189 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 ZNF420Q8TAQ5 688 aaPredicted RBP2.13□□□□□ -2.07
CPNE3-204ENST00000517862 RPEQ96AT9 228 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 FAM3DQ96BQ1 224 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 MS4A6EQ96DS6 147 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 SCGB3A2Q96PL1 93 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 ZNF382Q96SR6 550 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 PRSS27Q9BQR3 290 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 FRMD8P1Q9BZ68 369 aaPredicted RBP2.13□□□□□ -2.07
CPNE3-204ENST00000517862 ZNF107Q9UII5 783 aaPredicted RBP2.13□□□□□ -2.07
CPNE3-204ENST00000517862 CFL2Q9Y281 166 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 POFUT2Q9Y2G5 429 aa2.13□□□□□ -2.07
CPNE3-204ENST00000517862 F11RQ9Y624 299 aaKnown RBP2.13□□□□□ -2.07
CPNE3-204ENST00000517862 IGLV3-32A0A0A0MS00 114 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 A0A0B4J2A0 478 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 H3BN98 237 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 NPIPB7O75200 414 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 NDUFS6O75380 124 aaKnown RBP2.12□□□□□ -2.07
CPNE3-204ENST00000517862 SC5DO75845 299 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 GPR75O95800 540 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 OR5H8P0DN80 308 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 CD79AP11912 226 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 FUT3P21217 361 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 IMPA1P29218 277 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 RPL22P35268 128 aaKnown RBP2.12□□□□□ -2.07
CPNE3-204ENST00000517862 EIF1P41567 113 aaKnown RBP2.12□□□□□ -2.07
CPNE3-204ENST00000517862 ZNF140P52738 457 aaPredicted RBP2.12□□□□□ -2.07
CPNE3-204ENST00000517862 KRTAP10-8P60410 259 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 FOXF1Q12946 379 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 PMS2P3Q13401 168 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 SGCAQ16586 387 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 GUCA2BQ16661 112 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 C15orf32Q32M92 178 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 C9orf129Q5T035 196 aaKnown RBP2.12□□□□□ -2.07
CPNE3-204ENST00000517862 CCNJQ5T5M9 372 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 IL34Q6ZMJ4 242 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 MBOAT2Q6ZWT7 520 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 SLC35D2Q76EJ3 337 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 MRPL55Q7Z7F7 128 aaKnown RBP2.12□□□□□ -2.07
CPNE3-204ENST00000517862 OAFQ86UD1 273 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 LRRC8AQ8IWT6 810 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 SLC30A8Q8IWU4 369 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 GATSQ8NAP1 163 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 C19orf18Q8NEA5 215 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 NOXO1Q8NFA2 376 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 OR52L1Q8NGH7 329 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 PIGXQ8TBF5 258 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 SEH1LQ96EE3 360 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 ALS2CR12Q96Q35 445 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 PEBP4Q96S96 227 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 NAPGQ99747 312 aaPredicted RBP2.12□□□□□ -2.07
CPNE3-204ENST00000517862 RASL11BQ9BPW5 248 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 SCRT1Q9BWW7 348 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 METTL8Q9H825 291 aaKnown RBP2.12□□□□□ -2.07
CPNE3-204ENST00000517862 PLSCR3Q9NRY6 295 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 CHMP5Q9NZZ3 219 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 SHPKQ9UHJ6 478 aa2.12□□□□□ -2.07
CPNE3-204ENST00000517862 TRAPPC4Q9Y296 219 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms