RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 CSN3P07498 182 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 CELP19835 753 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 RPS27AP62979 156 aaKnown RBP6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 DCTN2Q13561 401 aaKnown RBP6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 YIF1BQ5BJH7 314 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 PLAC9Q5JTB6 97 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 TMEM65Q6PI78 240 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 TMEM91Q6ZNR0 172 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 OR5T1Q8NG75 326 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 MRPS24Q96EL2 167 aaKnown RBP6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 TMEM80Q96HE8 168 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 FAM110AQ9BQ89 295 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 C9orf16Q9BUW7 83 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 LPAR5Q9H1C0 372 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 WFDC10AQ9H1F0 79 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 PAK1IP1Q9NWT1 392 aaPredicted RBP6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 SLC23A1Q9UHI7 598 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 PSORS1C1Q9UIG5 152 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 AK3Q9UIJ7 227 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 KCNK7Q9Y2U2 307 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 ORC6Q9Y5N6 252 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 ABCA13Q86UQ4 5058 aa6.28□□□□□ -1.4
SCARNA20.3-201ENST00000516913 IGKV1D-8A0A087WSZ0 117 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 ANKRD34BA5PLL1 514 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 RBMY1BA6NDE4 496 aaKnown RBP6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 RBMY1EA6NEQ0 496 aaKnown RBP6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 SNTNA6NMZ2 147 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 DENRO43583 198 aaKnown RBP6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 CA11O75493 328 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 RBMY1DP0C7P1 496 aaKnown RBP6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 APELAP0DMC3 54 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 OR5H8P0DN80 308 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 CAPGP40121 348 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 VEGFCP49767 419 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 EWSR1Q01844 656 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 AKIRIN2Q53H80 203 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 ACTBL2Q562R1 376 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 UNQ5815/PRO19632Q6UWF5 114 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 ZNF562Q6V9R5 426 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 TMPRSS11AQ6ZMR5 421 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 ZNF554Q86TJ5 538 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 CDH26Q8IXH8 852 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 STX19Q8N4C7 294 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 FAM89BQ8N5H3 189 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 NANOGP1Q8N7R0 232 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 CYGBQ8WWM9 190 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 IL1F10Q8WWZ1 152 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 TM2D1Q9BX74 207 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 SPACA1Q9HBV2 294 aa6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 SMPD3Q9NY59 655 aaPredicted RBP6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 METTL1Q9UBP6 276 aaKnown RBP6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 ZMAT5Q9UDW3 170 aaKnown RBP6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 EXOSC1Q9Y3B2 195 aaKnown RBP6.27□□□□□ -1.41
SCARNA20.3-201ENST00000516913 A0A1B0GW64 132 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 SHISA3A0PJX4 238 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 ZNF785A8K8V0 405 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 LDLRAD4O15165 306 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 SLC22A1O15245 554 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 SLC25A17O43808 307 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 PRH1P02810 166 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 TRGV3P03979 118 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 CEACAM6P40199 344 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 SYNJ2BPP57105 145 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 TPPP2P59282 170 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 ZNF45Q02386 682 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 P2RY14Q15391 338 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 MOGAT2Q3SYC2 334 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 ACSM3Q53FZ2 586 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 PACRGLQ8N7B6 248 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 OR2AK2Q8NG84 335 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 PTX4Q96A99 478 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 CPNE2Q96FN4 548 aaPredicted RBP6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 MRPL48Q96GC5 212 aaKnown RBP6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 S100A13Q99584 98 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 HIPK2Q9H2X6 1198 aa6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 ELF5Q9UKW6 265 aaPredicted RBP6.26□□□□□ -1.41
SCARNA20.3-201ENST00000516913 TRBV6-6A0A0A6YYG2 114 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 E7EUB6 86 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 BMPR1BO00238 502 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 HSPA12AO43301 675 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 RGS11O94810 467 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 CD1AP06126 327 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 OR8U9P0C7N5 309 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 CLDN12P56749 244 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 BRWD1-AS2P59051 145 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 GPR176Q14439 515 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 IRF3Q14653 427 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 FXYD3Q14802 87 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 TMEM30BQ3MIR4 351 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 IGSF11Q5DX21 431 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 AHSA2Q719I0 299 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 POC5Q8NA72 575 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 SETD9Q8NE22 299 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 GRPEL2Q8TAA5 225 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 EDARADDQ8WWZ3 215 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 GALMQ96C23 342 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 ARHGAP5-AS1Q96IT6 56 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 CNBD2Q96M20 576 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 UQCC2Q9BRT2 126 aa6.25□□□□□ -1.41
SCARNA20.3-201ENST00000516913 VCX3BQ9H321 246 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms