RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 MAP1LC3CQ9BXW4 147 aa-0.09□□□□□ -2.42
RNU6-1088P-201ENST00000516850 TAS2R13Q9NYV9 303 aa-0.09□□□□□ -2.42
RNU6-1088P-201ENST00000516850 GREB1Q4ZG55 1949 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 EPPINO95925 133 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 CRYBA1P05813 215 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 STAG3L3P0CL85 134 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 IFNGR2P38484 337 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 CCR2P41597 374 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 OR1E2P47887 323 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 AQP4P55087 323 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 DYNLL1P63167 89 aaKnown RBP-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 TBC1D28Q2M2D7 210 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 PLPPR5Q32ZL2 321 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 CAVIN4Q5BKX8 364 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 CENPWQ5EE01 88 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 FAHD1Q6P587 224 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 ASCL4Q6XD76 172 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 SCGB1D4Q6XE38 83 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 ZNF705AQ6ZN79 300 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 PDCL2Q8N4E4 241 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 OR13C9Q8NGT0 318 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 KIAA1143Q96AT1 154 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 TMA16Q96EY4 203 aaKnown RBP-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 MYCBPQ99417 103 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 OR51E2Q9H255 320 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 LINC00527Q9UJ94 153 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 TIMM9Q9Y5J7 89 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 KCPQ6ZWJ8 1503 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 RAB3GAP2Q9H2M9 1393 aa-0.1□□□□□ -2.43
RNU6-1088P-201ENST00000516850 PHLPP2Q6ZVD8 1323 aa-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 APCP25054 2843 aa-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 NDUFB2O95178 105 aa-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 MT-CO2P00403 227 aa-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 MBP02144 154 aa-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 RPL27AP46776 148 aaKnown RBP-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 STC1P52823 247 aa-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 TSPAN5P62079 268 aa-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 C10orf55Q5SWW7 151 aa-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 C12orf29Q8N999 325 aa-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 OR2D3Q8NGH3 330 aa-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 FAM45AQ8TCE6 357 aa-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 RPS4Y2Q8TD47 263 aa-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 NKX6-2Q9C056 277 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 MED28Q9H204 178 aa-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 METTL8Q9H825 291 aaKnown RBP-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 ALPK2Q86TB3 2170 aa-0.11□□□□□ -2.43
RNU6-1088P-201ENST00000516850 SIPA1L1O43166 1804 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 TRBV6-7A0A0A0MS04 114 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 FABP7O15540 132 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 OR13C7P0DN81 318 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 PSMB8P28062 276 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 STK38Q15208 465 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 TEX36Q5VZQ5 186 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 FAM173BQ6P4H8 233 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 PID1Q7Z2X4 250 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 MTERF4Q7Z6M4 381 aaKnown RBP-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 TMEM86AQ8N2M4 240 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 TMEM75Q8N9X5 138 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 OR1L8Q8NGR8 309 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 TRABDQ9H4I3 376 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 TMBIM4Q9HC24 238 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 SLC2A9Q9NRM0 540 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 MS4A12Q9NXJ0 267 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 CUL9Q8IWT3 2517 aa-0.12□□□□□ -2.43
RNU6-1088P-201ENST00000516850 TNRC6AQ8NDV7 1962 aaKnown RBP-0.13□□□□□ -2.43
RNU6-1088P-201ENST00000516850 IGHV1-18A0A0C4DH31 117 aa-0.13□□□□□ -2.43
RNU6-1088P-201ENST00000516850 A0A1W2PPV4 95 aa-0.13□□□□□ -2.43
RNU6-1088P-201ENST00000516850 hCG_2039718K7EN88 272 aa-0.13□□□□□ -2.43
RNU6-1088P-201ENST00000516850 SRMP19623 302 aa-0.13□□□□□ -2.43
RNU6-1088P-201ENST00000516850 BGNP21810 368 aa-0.13□□□□□ -2.43
RNU6-1088P-201ENST00000516850 TPI1P60174 286 aa-0.13□□□□□ -2.43
RNU6-1088P-201ENST00000516850 CD164Q04900 197 aa-0.13□□□□□ -2.43
RNU6-1088P-201ENST00000516850 SSX6Q7RTT6 188 aa-0.13□□□□□ -2.43
RNU6-1088P-201ENST00000516850 SLC22A24Q8N4F4 322 aa-0.13□□□□□ -2.43
RNU6-1088P-201ENST00000516850 OR51H1Q8NH63 302 aa-0.13□□□□□ -2.43
RNU6-1088P-201ENST00000516850 GAL3ST2Q9H3Q3 398 aa-0.13□□□□□ -2.43
RNU6-1088P-201ENST00000516850 C10orf95Q9H7T3 257 aa-0.13□□□□□ -2.43
RNU6-1088P-201ENST00000516850 DICER1Q9UPY3 1922 aaKnown RBP-0.13□□□□□ -2.43
RNU6-1088P-201ENST00000516850 REREQ9P2R6 1566 aa-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 A0A0D9SEW6 157 aa-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 CDIPTO14735 213 aa-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 POLR3GO15318 223 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 CREBL2O60519 120 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 SHOX2O60902 331 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 SC5DO75845 299 aa-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 IGLV3-27P01718 113 aa-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 RBM11P57052 281 aaKnown RBP-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 VSNL1P62760 191 aa-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 HIST1H4AP62805 103 aaKnown RBP-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 BTN3A2P78410 334 aa-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 GTF2BQ00403 316 aa-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 ZNF565Q8N9K5 539 aa-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 IFT81Q8WYA0 676 aa-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 SERPINI1Q99574 410 aa-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 SNX10Q9Y5X0 201 aa-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 SMARCA4P51532 1647 aa-0.14□□□□□ -2.43
RNU6-1088P-201ENST00000516850 CHD5Q8TDI0 1954 aa-0.15□□□□□ -2.43
RNU6-1088P-201ENST00000516850 A0A087WX48 190 aa-0.15□□□□□ -2.43
RNU6-1088P-201ENST00000516850 TRIM64CA6NLI5 447 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms