RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 ZNF727A8MUV8 499 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 B4DEV8 164 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 KCNK1O00180 336 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 ATP8B1O43520 1251 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 MYO1DO94832 1006 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 CATP04040 527 aaKnown RBP-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 PSMA1P25786 263 aaKnown RBP-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 OPRM1P35372 400 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 RBM11P57052 281 aaKnown RBP-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 GMFBP60983 142 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 RPL18AQ02543 176 aaKnown RBP-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 ANKDD1AQ495B1 522 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 C9orf64Q5T6V5 341 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 AMTNQ6UX39 209 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 RPP25LQ8N5L8 163 aaKnown RBP-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 GATD1Q8NB37 220 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 SPC24Q8NBT2 197 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 OR8G5Q8NG78 346 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 TUBGCP3Q96CW5 907 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 ZMYND19Q96E35 227 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 OR2M4Q96R27 311 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 SLC50A1Q9BRV3 221 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 THUMPD2Q9BTF0 503 aaKnown RBP-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 SHCBP1LQ9BZQ2 653 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 DDIT4Q9NX09 232 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 TAS2R4Q9NYW5 299 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 PLECQ15149 4684 aaKnown RBP-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 FAT3Q8TDW7 4589 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 TRBV6-4A0A1B0GX49 114 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 LINC00862A6NCI5 91 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 TMEM250H0YL14 139 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 K7EQM0 130 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 NDUFAB1O14561 156 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 CREBL2O60519 120 aaPredicted RBP-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 CST1P01037 141 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 KRT16P08779 473 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 OR13C7P0DN81 318 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 NCF1P14598 390 aaPredicted RBP-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 ZNF24P17028 368 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 ALDH3A1P30838 453 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 IFNAR2P48551 515 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 GABARAPL2P60520 117 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 RPL37P61927 97 aaKnown RBP-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 STX5Q13190 355 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 XRCC4Q13426 336 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 MAPK14Q16539 360 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 MIAQ16674 131 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 CLEC12BQ2HXU8 276 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 CEP55Q53EZ4 464 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 ACSM3Q53FZ2 586 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 C1orf137Q5JT78 98 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 THOC7Q6I9Y2 204 aaKnown RBP-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 EPGNQ6UW88 154 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 ZYG11BQ9C0D3 744 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 MIXL1Q9H2W2 232 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 XPNPEP1Q9NQW7 623 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 HHLA2Q9UM44 414 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 TFR2Q9UP52 801 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 LAMC1P11047 1609 aa-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 PRRC2CQ9Y520 2896 aaKnown RBP-2.4□□□□□ -2.79
RNU6-557P-201ENST00000516842 NIPBLQ6KC79 2804 aaeCLIP-2.41□□□□□ -2.79
RNU6-557P-201ENST00000516842 TRBV9A0A0B4J1U6 114 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 A0A0J9YW62 118 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 FUOMA2VDF0 154 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 TRIM64CA6NLI5 447 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 FAAHO00519 579 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 SNNO75324 88 aaPredicted RBP-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 TFPTP0C1Z6 253 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 MP68P56378 58 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 ROMO1P60602 79 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 FGF12P61328 243 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 BST2Q10589 180 aaKnown RBP-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 OR4D11Q8NGI4 311 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 OR10Z1Q8NGY1 313 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 RASSF5Q8WWW0 418 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 RILPQ96NA2 401 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 TRNT1Q96Q11 434 aaKnown RBP-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 CCL19Q99731 98 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 MYH16Q9H6N6 1097 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 TMEM165Q9HC07 324 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 VAPAQ9P0L0 249 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 MRPL27Q9P0M9 148 aaKnown RBP-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 PSMC3IPQ9P2W1 217 aaPredicted RBP-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 SPTA1P02549 2419 aa-2.41□□□□□ -2.8
RNU6-557P-201ENST00000516842 SPTBN1Q01082 2364 aaKnown RBP-2.42□□□□□ -2.8
RNU6-557P-201ENST00000516842 HEATR5AQ86XA9 2040 aa-2.42□□□□□ -2.8
RNU6-557P-201ENST00000516842 ESPL1Q14674 2120 aa-2.42□□□□□ -2.8
RNU6-557P-201ENST00000516842 UNC13CQ8NB66 2214 aa-2.42□□□□□ -2.8
RNU6-557P-201ENST00000516842 ANKHD1Q8IWZ3 2542 aaKnown RBP-2.42□□□□□ -2.8
RNU6-557P-201ENST00000516842 KBTBD11-OT1A0A1B0GTJ5 212 aa-2.42□□□□□ -2.8
RNU6-557P-201ENST00000516842 HMGB1P1B2RPK0 211 aaPredicted RBP-2.42□□□□□ -2.8
RNU6-557P-201ENST00000516842 CRXO43186 299 aaPredicted RBP-2.42□□□□□ -2.8
RNU6-557P-201ENST00000516842 ARF4P18085 180 aaPredicted RBP-2.42□□□□□ -2.8
RNU6-557P-201ENST00000516842 ATP6V0CP27449 155 aa-2.42□□□□□ -2.8
RNU6-557P-201ENST00000516842 ETV6P41212 452 aa-2.42□□□□□ -2.8
RNU6-557P-201ENST00000516842 STC1P52823 247 aa-2.42□□□□□ -2.8
RNU6-557P-201ENST00000516842 BPIFB3P59826 476 aa-2.42□□□□□ -2.8
RNU6-557P-201ENST00000516842 RHOAP61586 193 aa-2.42□□□□□ -2.8
RNU6-557P-201ENST00000516842 PAFAH1B2P68402 229 aa-2.42□□□□□ -2.8
RNU6-557P-201ENST00000516842 HTD2P86397 168 aa-2.42□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms