RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 PPP1R1AQ13522 171 aa13.65□□□□□ -0.22
AP3S1-208ENST00000515066 ABCA11PQ4W5N1 156 aa13.65□□□□□ -0.22
AP3S1-208ENST00000515066 NCR3LG1Q68D85 454 aa13.65□□□□□ -0.22
AP3S1-208ENST00000515066 FAHD2BQ6P2I3 314 aaPredicted RBP13.65□□□□□ -0.22
AP3S1-208ENST00000515066 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.65□□□□□ -0.22
AP3S1-208ENST00000515066 OR10X1Q8NGY0 326 aa13.65□□□□□ -0.22
AP3S1-208ENST00000515066 RTN4IP1Q8WWV3 396 aaPredicted RBP13.65□□□□□ -0.22
AP3S1-208ENST00000515066 FAHD2AQ96GK7 314 aa13.65□□□□□ -0.22
AP3S1-208ENST00000515066 C7orf69Q9H7B7 122 aa13.65□□□□□ -0.22
AP3S1-208ENST00000515066 PIPOXQ9P0Z9 390 aa13.65□□□□□ -0.22
AP3S1-208ENST00000515066 GAB2Q9UQC2 676 aa13.65□□□□□ -0.22
AP3S1-208ENST00000515066 AUP1Q9Y679 476 aa13.65□□□□□ -0.22
AP3S1-208ENST00000515066 HIVEP1P15822 2718 aa13.65□□□□□ -0.22
AP3S1-208ENST00000515066 CRYM-AS1A6NIL9 109 aa13.64□□□□□ -0.23
AP3S1-208ENST00000515066 SMAD7O15105 426 aaKnown RBP13.64□□□□□ -0.23
AP3S1-208ENST00000515066 PGLYRP1O75594 196 aaPredicted RBP13.64□□□□□ -0.23
AP3S1-208ENST00000515066 DHRS2Q13268 280 aa13.64□□□□□ -0.23
AP3S1-208ENST00000515066 DIAPH2-AS1Q14236 149 aa13.64□□□□□ -0.23
AP3S1-208ENST00000515066 GLDNQ6ZMI3 551 aaPredicted RBP13.64□□□□□ -0.23
AP3S1-208ENST00000515066 ZNF833PQ6ZTB9 187 aa13.64□□□□□ -0.23
AP3S1-208ENST00000515066 CMTM1Q8IZ96 169 aa13.64□□□□□ -0.23
AP3S1-208ENST00000515066 ZBTB34Q8NCN2 500 aa13.64□□□□□ -0.23
AP3S1-208ENST00000515066 OR52B4Q8NGK2 314 aa13.64□□□□□ -0.23
AP3S1-208ENST00000515066 LHX4Q969G2 390 aa13.64□□□□□ -0.23
AP3S1-208ENST00000515066 SEC22CQ9BRL7 303 aa13.64□□□□□ -0.23
AP3S1-208ENST00000515066 GHITMQ9H3K2 345 aa13.64□□□□□ -0.23
AP3S1-208ENST00000515066 CENPVL3A0A0U1RRI6 287 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 C7orf66A4D0T2 115 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 LINC00473A8K010 186 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 BUB1B-PAK6H3BSN5 160 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 TOR1AO14656 332 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 MPPED1O15442 326 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 IL5P05113 134 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 PRRX1P54821 245 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 TAS2R31P59538 309 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 UBE2MP61081 183 aaKnown RBP13.63□□□□□ -0.23
AP3S1-208ENST00000515066 RPL30P62888 115 aaKnown RBP13.63□□□□□ -0.23
AP3S1-208ENST00000515066 TBC1D26Q86UD7 250 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 LY6LH3BQJ8 138 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 DHFRP00374 187 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 ARG1P05089 322 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 DUTP33316 252 aaKnown RBP13.63□□□□□ -0.23
AP3S1-208ENST00000515066 UBE2E1P51965 193 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 CYB5R2Q6BCY4 276 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 DRAXINQ8NBI3 349 aaPredicted RBP13.63□□□□□ -0.23
AP3S1-208ENST00000515066 NAA60Q9H7X0 242 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 ALG5Q9Y673 324 aa13.63□□□□□ -0.23
AP3S1-208ENST00000515066 A0A0A6YYJ9 748 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 TRAV40A0A0B4J280 105 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 A0A1W2PRD5 423 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 A0A1W2PRF3 423 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 A0A1W2PRM7 423 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 C9orf170A2RU37 121 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 J3QLI3 93 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 M0R1X1 148 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 PRAF2O60831 178 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 HLA-AP01891 365 aaKnown RBP13.62□□□□□ -0.23
AP3S1-208ENST00000515066 F2RP25116 425 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 BRWD1-AS2P59051 145 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 C4orf46Q504U0 113 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 LHFPL4Q7Z7J7 247 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 LYG2Q86SG7 212 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 CCDC71LQ8N9Z2 235 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 OR51H1Q8NH63 302 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 GALNT14Q96FL9 552 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 AJUBAQ96IF1 538 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 TP53RKQ96S44 253 aa13.62□□□□□ -0.23
AP3S1-208ENST00000515066 MTORP42345 2549 aa13.61□□□□□ -0.23
AP3S1-208ENST00000515066 IGHV4-38-2P0DP08 117 aa13.61□□□□□ -0.23
AP3S1-208ENST00000515066 VAMP1P23763 118 aa13.61□□□□□ -0.23
AP3S1-208ENST00000515066 KLF17Q5JT82 389 aaPredicted RBP13.61□□□□□ -0.23
AP3S1-208ENST00000515066 FAM71F2Q6NXP2 309 aa13.61□□□□□ -0.23
AP3S1-208ENST00000515066 SGPP2Q8IWX5 399 aa13.61□□□□□ -0.23
AP3S1-208ENST00000515066 PIP4P2Q8N4L2 257 aa13.61□□□□□ -0.23
AP3S1-208ENST00000515066 C17orf50Q8WW18 174 aa13.61□□□□□ -0.23
AP3S1-208ENST00000515066 S1PR3Q99500 378 aa13.61□□□□□ -0.23
AP3S1-208ENST00000515066 HSD17B10Q99714 261 aaKnown RBP13.61□□□□□ -0.23
AP3S1-208ENST00000515066 TNCP24821 2201 aa13.6□□□□□ -0.23
AP3S1-208ENST00000515066 TEX13DA0A0J9YY54 714 aaPredicted RBP13.6□□□□□ -0.23
AP3S1-208ENST00000515066 C3orf85A0A1B0GTC6 90 aa13.6□□□□□ -0.23
AP3S1-208ENST00000515066 CYSRT1A8MQ03 144 aa13.6□□□□□ -0.23
AP3S1-208ENST00000515066 VGLL3A8MV65 326 aa13.6□□□□□ -0.23
AP3S1-208ENST00000515066 SFT2D2O95562 160 aa13.6□□□□□ -0.23
AP3S1-208ENST00000515066 OR5AC1P0C628 307 aa13.6□□□□□ -0.23
AP3S1-208ENST00000515066 CT45A6P0DMU7 189 aa13.6□□□□□ -0.23
AP3S1-208ENST00000515066 CT45A5P0DMU8 189 aa13.6□□□□□ -0.23
AP3S1-208ENST00000515066 CT45A7P0DMV0 189 aa13.6□□□□□ -0.23
AP3S1-208ENST00000515066 REG1BP48304 166 aa13.6□□□□□ -0.23
AP3S1-208ENST00000515066 ZNF66Q6ZN08 573 aa13.6□□□□□ -0.23
AP3S1-208ENST00000515066 GLYATL2Q8WU03 294 aa13.6□□□□□ -0.23
AP3S1-208ENST00000515066 DDB2Q92466 427 aa13.6□□□□□ -0.23
AP3S1-208ENST00000515066 MRPL20Q9BYC9 149 aaKnown RBP13.6□□□□□ -0.23
AP3S1-208ENST00000515066 PRR13Q9NZ81 148 aa13.6□□□□□ -0.23
AP3S1-208ENST00000515066 AMMECR1Q9Y4X0 333 aaPredicted RBP13.6□□□□□ -0.23
AP3S1-208ENST00000515066 DUS4LO95620 317 aaKnown RBP13.59□□□□□ -0.23
AP3S1-208ENST00000515066 HTR1DP28221 377 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 S100GP29377 79 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 SAA4P35542 130 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 SLC9A3R2Q15599 337 aa13.59□□□□□ -0.23
AP3S1-208ENST00000515066 SP6Q3SY56 376 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms