RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 GPR12P47775 334 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 DYNLT3P51808 116 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 DEFA1P59665 94 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 DEFA3P59666 94 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 TAGLNQ01995 201 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 RBMS2Q15434 407 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 TPTE2P1Q5T6R2 138 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 MZT2BQ6NZ67 158 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 C16orf87Q6PH81 154 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 IDO2Q6ZQW0 420 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 OR8H3Q8N146 312 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 LYG1Q8N1E2 194 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 ZDHHC22Q8N966 263 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 ZFAND1Q8TCF1 268 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 SLC5A7Q9GZV3 580 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 MCUBQ9NWR8 336 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 COPZ2Q9P299 210 aa9.69□□□□□ -0.86
PDLIM5-220ENST00000514830 GPR31O00270 319 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 HSD17B6O14756 317 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 NDUFB6O95139 128 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 CTSDP07339 412 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 RND3P61587 244 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 PRB3Q04118 309 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 SCGB2B2Q4G0G5 96 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 RUSC1-AS1Q66K80 236 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 BRD3OSQ6XYD6 125 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 LHFPL4Q7Z7J7 247 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 DRAM1Q8N682 238 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 DUSP18Q8NEJ0 188 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 SECTM1Q8WVN6 248 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 RTN4IP1Q8WWV3 396 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 RPEQ96AT9 228 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 C5orf30Q96GV9 206 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 ABHD14BQ96IU4 210 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 ADTRPQ96IZ2 230 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 SDHAF2Q9NX18 166 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 ZNRD1Q9P1U0 126 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 GPR132Q9UNW8 380 aa9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 RBM7Q9Y580 266 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-220ENST00000514830 A0A1W2PPI3 338 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 IFNA2P01563 188 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 FBP1P09467 338 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 ARHGDIBP52566 201 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 FXYD4P59646 89 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 ZNF66Q6ZN08 573 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 ZNF818PQ6ZRF7 136 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 TGIF2LXQ8IUE1 241 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 PDZD9Q8IXQ8 264 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 CMTM1Q8IZ96 169 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 TCTEX1D1Q8N7M0 179 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 ZFAND2BQ8WV99 257 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 TOMM40LQ969M1 308 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 HSD17B10Q99714 261 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 MDFIQ99750 246 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 BEX2Q9BXY8 128 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 MS4A7Q9GZW8 240 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 CCL28Q9NRJ3 127 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 FAM212BQ9NTI7 297 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 RNF150Q9ULK6 438 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 FN1P02751 2386 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 SVEP1Q4LDE5 3571 aa9.67□□□□□ -0.86
PDLIM5-220ENST00000514830 ATRQ13535 2644 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 IGHV1-3A0A0C4DH29 117 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 A0A0U1RQK1 487 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 FAM90A9PA6NNJ1 464 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 B3GALNT1O75752 331 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 PTTG1O95997 202 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 S100GP29377 79 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 DUTP33316 252 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 SRP14P37108 136 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 THBS3P49746 956 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 CCR6P51684 374 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 UBE2MP61081 183 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 RPL39P5Q59GN2 51 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 KCTD9Q7L273 389 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 THNSL2Q86YJ6 484 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 DYNAPQ8N1N2 210 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 OR5AN1Q8NGI8 311 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 MARCH1Q8TCQ1 289 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 DDB2Q92466 427 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 CFHR4Q92496 578 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 NABP2Q9BQ15 211 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 RTBDNQ9BSG5 229 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 DPAGT1Q9H3H5 408 aa9.66□□□□□ -0.86
PDLIM5-220ENST00000514830 IGHV3OR16-10A0A075B7F0 116 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 LINC00854A0A1B0GVQ3 168 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 A0A1W2PRD5 423 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 A0A1W2PRF3 423 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 A0A1W2PRM7 423 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 RNF212BA8MTL3 300 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 M0R1X1 148 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 RBFOX2O43251 390 aaKnown RBP eCLIP9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 PGLYRP1O75594 196 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 CT45A6P0DMU7 189 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 CT45A5P0DMU8 189 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 CT45A7P0DMV0 189 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 PGAM2P15259 253 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 CD1BP29016 333 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 MC5RP33032 325 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 MECP2P51608 486 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms