RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 ZNF273Q14593 569 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 DEFB112Q30KQ8 113 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 PAN3Q58A45 887 aaKnown RBP6.79□□□□□ -1.32
CCL28-204ENST00000514421 KRBOX4Q5JUW0 171 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 LIN54Q6MZP7 749 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 BRICD5Q6PL45 260 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 BRD3OSQ6XYD6 125 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 ZNF497Q6ZNH5 498 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 MOB1BQ7L9L4 216 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 PDZD9Q8IXQ8 264 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 TPRX1Q8N7U7 411 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 SIGLECL1Q8N7X8 197 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 ZNF565Q8N9K5 539 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 OR4A4PQ8NGN8 299 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 MRPL30Q8TCC3 161 aaKnown RBP6.79□□□□□ -1.32
CCL28-204ENST00000514421 MAFIPQ8WZ33 124 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 DYRK2Q92630 601 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 WDR89Q96FK6 387 aaPredicted RBP6.79□□□□□ -1.32
CCL28-204ENST00000514421 ZNF48Q96MX3 618 aaPredicted RBP6.79□□□□□ -1.32
CCL28-204ENST00000514421 ZNF714Q96N38 554 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 DPCDQ9BVM2 203 aaPredicted RBP6.79□□□□□ -1.32
CCL28-204ENST00000514421 CHIAQ9BZP6 476 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 FXYD6Q9H0Q3 95 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 MBNL3Q9NUK0 354 aaKnown RBP6.79□□□□□ -1.32
CCL28-204ENST00000514421 TAS2R3Q9NYW6 316 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 OR6C3Q9NZP0 311 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 C14orf166Q9Y224 244 aaKnown RBP6.79□□□□□ -1.32
CCL28-204ENST00000514421 UBE2J1Q9Y385 318 aaPredicted RBP6.79□□□□□ -1.32
CCL28-204ENST00000514421 SOX21Q9Y651 276 aaPredicted RBP6.79□□□□□ -1.32
CCL28-204ENST00000514421 LINC00312Q9Y6C7 94 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 KIAA2026Q5HYC2 2103 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 TRGV10A0A0A0MS01 117 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 ODAMA1E959 279 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 NPFFO15130 113 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 ATP6V1G1O75348 118 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 SIX6O95475 246 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 CXCL2P19875 107 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 GZMHP20718 246 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 BAMBIQ13145 260 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 ZNF345Q14585 488 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 HERPUD1Q15011 391 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 ANKRD55Q3KP44 614 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 RUSC1-AS1Q66K80 236 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 SLC35E4Q6ICL7 350 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 TEX261Q6UWH6 196 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 SLC38A6Q8IZM9 456 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 OR13D1Q8NGV5 346 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 COQ8AQ8NI60 647 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 COQ2Q96H96 371 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 MDFIQ99750 246 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 TOLLIPQ9H0E2 274 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 FAM96BQ9Y3D0 163 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 U3KQ87 197 aa6.78□□□□□ -1.32
CCL28-204ENST00000514421 IGKV1-6A0A0C4DH72 117 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 A0A0U1RQK1 487 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 A0A1W2PRD5 423 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 A0A1W2PRF3 423 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 A0A1W2PRM7 423 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 MEX3AA1L020 520 aaKnown RBP6.77□□□□□ -1.33
CCL28-204ENST00000514421 RNF212BA8MTL3 300 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 CLDN34H7C241 214 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 MPC2O95563 127 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 PPYP01298 95 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 CGB3P0DN86 165 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 CGB7P0DN87 165 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 IGHV1-8P0DP01 117 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 VAMP1P23763 118 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 FCGR2CP31995 323 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 GLP1RP43220 463 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 DLX1P56177 255 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 LGALS4P56470 323 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 SRSF2Q01130 221 aaKnown RBP6.77□□□□□ -1.33
CCL28-204ENST00000514421 PRB3Q04118 309 aaPredicted RBP6.77□□□□□ -1.33
CCL28-204ENST00000514421 KLRD1Q13241 179 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 ATXN7L3Q14CW9 347 aaPredicted RBP6.77□□□□□ -1.33
CCL28-204ENST00000514421 MIDNQ504T8 468 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 IGSF11Q5DX21 431 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 HCP5Q6MZN7 132 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 C11orf87Q6NUJ2 197 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 C11orf88Q6PI97 169 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 Q6YL49 198 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 KCTD9Q7L273 389 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 TCF23Q7RTU1 214 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 SGPP2Q8IWX5 399 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 PNKDQ8N490 385 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 ZNF680Q8NEM1 530 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 PLPPR1Q8TBJ4 325 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 FAM216AQ8WUB2 273 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 GAL3ST2Q9H3Q3 398 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 NAA60Q9H7X0 242 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 TNFSF18Q9UNG2 199 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 SESN1Q9Y6P5 492 aa6.77□□□□□ -1.33
CCL28-204ENST00000514421 A0A0D9SG52 128 aa6.76□□□□□ -1.33
CCL28-204ENST00000514421 KBTBD11-OT1A0A1B0GTJ5 212 aa6.76□□□□□ -1.33
CCL28-204ENST00000514421 TMEM30CPA0ZSE6 113 aa6.76□□□□□ -1.33
CCL28-204ENST00000514421 ZNF729A6NN14 1252 aaPredicted RBP6.76□□□□□ -1.33
CCL28-204ENST00000514421 HSPB6O14558 160 aa6.76□□□□□ -1.33
CCL28-204ENST00000514421 B3GALNT1O75752 331 aa6.76□□□□□ -1.33
CCL28-204ENST00000514421 OR2F2O95006 317 aa6.76□□□□□ -1.33
CCL28-204ENST00000514421 FBP1P09467 338 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms