RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 PRDM13Q9H4Q3 707 aa16.28■□□□□ 0.2
USP53-208ENST00000514305 GAB2Q9UQC2 676 aa16.28■□□□□ 0.2
USP53-208ENST00000514305 RBMX2Q9Y388 322 aaKnown RBP16.28■□□□□ 0.2
USP53-208ENST00000514305 HILPDAQ9Y5L2 63 aa16.28■□□□□ 0.2
USP53-208ENST00000514305 DISC1C4P0D8 188 aa16.27■□□□□ 0.2
USP53-208ENST00000514305 RAB3DO95716 219 aa16.27■□□□□ 0.2
USP53-208ENST00000514305 CRYBA1P05813 215 aa16.27■□□□□ 0.2
USP53-208ENST00000514305 NFYAP23511 347 aaPredicted RBP16.27■□□□□ 0.2
USP53-208ENST00000514305 ZNF134P52741 427 aa16.27■□□□□ 0.2
USP53-208ENST00000514305 ZNF137PP52743 207 aa16.27■□□□□ 0.2
USP53-208ENST00000514305 ZNF816Q0VGE8 651 aaPredicted RBP16.27■□□□□ 0.2
USP53-208ENST00000514305 STEAP1BQ6NZ63 245 aa16.27■□□□□ 0.2
USP53-208ENST00000514305 LPCAT3Q6P1A2 487 aa16.27■□□□□ 0.2
USP53-208ENST00000514305 DHRS11Q6UWP2 260 aa16.27■□□□□ 0.2
USP53-208ENST00000514305 LHFPL4Q7Z7J7 247 aa16.27■□□□□ 0.2
USP53-208ENST00000514305 TGIF2LXQ8IUE1 241 aa16.27■□□□□ 0.2
USP53-208ENST00000514305 LYSMD2Q8IV50 215 aa16.27■□□□□ 0.2
USP53-208ENST00000514305 ARRDC1Q8N5I2 433 aa16.27■□□□□ 0.2
USP53-208ENST00000514305 OR5R1Q8NH85 324 aa16.27■□□□□ 0.2
USP53-208ENST00000514305 SRRQ9GZT4 340 aa16.27■□□□□ 0.2
USP53-208ENST00000514305 MGAM2Q2M2H8 2515 aa16.26■□□□□ 0.19
USP53-208ENST00000514305 HSD17B6O14756 317 aa16.26■□□□□ 0.19
USP53-208ENST00000514305 LANCL1O43813 399 aa16.26■□□□□ 0.19
USP53-208ENST00000514305 OR8U9P0C7N5 309 aa16.26■□□□□ 0.19
USP53-208ENST00000514305 S100GP29377 79 aa16.26■□□□□ 0.19
USP53-208ENST00000514305 RFX2P48378 723 aa16.26■□□□□ 0.19
USP53-208ENST00000514305 ZNF846Q147U1 533 aa16.26■□□□□ 0.19
USP53-208ENST00000514305 ZNF79Q15937 498 aa16.26■□□□□ 0.19
USP53-208ENST00000514305 Q6YL49 198 aa16.26■□□□□ 0.19
USP53-208ENST00000514305 LDLRAD3Q86YD5 345 aa16.26■□□□□ 0.19
USP53-208ENST00000514305 TMEM86BQ8N661 226 aa16.26■□□□□ 0.19
USP53-208ENST00000514305 OR8U1Q8NH10 309 aa16.26■□□□□ 0.19
USP53-208ENST00000514305 SSMEM1Q8WWF3 244 aa16.26■□□□□ 0.19
USP53-208ENST00000514305 TNFRSF19Q9NS68 423 aa16.26■□□□□ 0.19
USP53-208ENST00000514305 ANKRD20A5PA0PJZ0 165 aa16.25■□□□□ 0.19
USP53-208ENST00000514305 LY6LH3BQJ8 138 aa16.25■□□□□ 0.19
USP53-208ENST00000514305 SLC31A2O15432 143 aa16.25■□□□□ 0.19
USP53-208ENST00000514305 TUSC2O75896 110 aa16.25■□□□□ 0.19
USP53-208ENST00000514305 CD74P04233 296 aa16.25■□□□□ 0.19
USP53-208ENST00000514305 CD3DP04234 171 aa16.25■□□□□ 0.19
USP53-208ENST00000514305 MDKP21741 143 aaPredicted RBP16.25■□□□□ 0.19
USP53-208ENST00000514305 CD40LGP29965 261 aa16.25■□□□□ 0.19
USP53-208ENST00000514305 ECI1P42126 302 aa16.25■□□□□ 0.19
USP53-208ENST00000514305 DYNLT3P51808 116 aa16.25■□□□□ 0.19
USP53-208ENST00000514305 LRRC75BQ2VPJ9 315 aa16.25■□□□□ 0.19
USP53-208ENST00000514305 ZNF2Q9BSG1 426 aaPredicted RBP16.25■□□□□ 0.19
USP53-208ENST00000514305 CCDC32Q9BV29 185 aa16.25■□□□□ 0.19
USP53-208ENST00000514305 ZNRD1Q9P1U0 126 aa16.25■□□□□ 0.19
USP53-208ENST00000514305 PITPNC1Q9UKF7 332 aa16.25■□□□□ 0.19
USP53-208ENST00000514305 POMT1Q9Y6A1 747 aa16.25■□□□□ 0.19
USP53-208ENST00000514305 A0A1B0GUS0 222 aa16.24■□□□□ 0.19
USP53-208ENST00000514305 FAM181BA6NEQ2 426 aa16.24■□□□□ 0.19
USP53-208ENST00000514305 CENPXA8MT69 81 aa16.24■□□□□ 0.19
USP53-208ENST00000514305 VGLL3A8MV65 326 aa16.24■□□□□ 0.19
USP53-208ENST00000514305 PPYP01298 95 aa16.24■□□□□ 0.19
USP53-208ENST00000514305 PPP5CP53041 499 aa16.24■□□□□ 0.19
USP53-208ENST00000514305 TAGLNQ01995 201 aaKnown RBP16.24■□□□□ 0.19
USP53-208ENST00000514305 MSMO1Q15800 293 aa16.24■□□□□ 0.19
USP53-208ENST00000514305 ZNF57Q68EA5 555 aaPredicted RBP16.24■□□□□ 0.19
USP53-208ENST00000514305 ZNF645Q8N7E2 425 aa16.24■□□□□ 0.19
USP53-208ENST00000514305 ZBTB34Q8NCN2 500 aa16.24■□□□□ 0.19
USP53-208ENST00000514305 RTN4IP1Q8WWV3 396 aaPredicted RBP16.24■□□□□ 0.19
USP53-208ENST00000514305 TAF15Q92804 592 aaKnown RBP eCLIP16.24■□□□□ 0.19
USP53-208ENST00000514305 ST6GALNAC6Q969X2 333 aa16.24■□□□□ 0.19
USP53-208ENST00000514305 AGMATQ9BSE5 352 aa16.24■□□□□ 0.19
USP53-208ENST00000514305 OR2D2Q9H210 308 aa16.24■□□□□ 0.19
USP53-208ENST00000514305 IFI27L2Q9H2X8 130 aa16.24■□□□□ 0.19
USP53-208ENST00000514305 AKIP1Q9NQ31 210 aa16.24■□□□□ 0.19
USP53-208ENST00000514305 SCP2D1Q9UJQ7 156 aa16.24■□□□□ 0.19
USP53-208ENST00000514305 PKD1L1Q8TDX9 2849 aa16.24■□□□□ 0.19
USP53-208ENST00000514305 FAM53AQ6NSI3 398 aaPredicted RBP16.23■□□□□ 0.19
USP53-208ENST00000514305 MOB3BQ86TA1 216 aa16.23■□□□□ 0.19
USP53-208ENST00000514305 OR4F5Q8NH21 305 aa16.23■□□□□ 0.19
USP53-208ENST00000514305 ABHD14BQ96IU4 210 aa16.23■□□□□ 0.19
USP53-208ENST00000514305 ADTRPQ96IZ2 230 aa16.23■□□□□ 0.19
USP53-208ENST00000514305 AKR1E2Q96JD6 320 aa16.23■□□□□ 0.19
USP53-208ENST00000514305 SSX3Q99909 188 aa16.23■□□□□ 0.19
USP53-208ENST00000514305 PRRT1Q99946 306 aa16.23■□□□□ 0.19
USP53-208ENST00000514305 BEX1Q9HBH7 125 aa16.23■□□□□ 0.19
USP53-208ENST00000514305 RNF150Q9ULK6 438 aa16.23■□□□□ 0.19
USP53-208ENST00000514305 MMP24Q9Y5R2 645 aa16.23■□□□□ 0.19
USP53-208ENST00000514305 SAA2-SAA4A0A096LPE2 208 aa16.22■□□□□ 0.19
USP53-208ENST00000514305 AMY2AP04746 511 aa16.22■□□□□ 0.19
USP53-208ENST00000514305 FAM106CPP0CH98 169 aa16.22■□□□□ 0.19
USP53-208ENST00000514305 SAA2P0DJI9 122 aaPredicted RBP16.22■□□□□ 0.19
USP53-208ENST00000514305 AADACP22760 399 aa16.22■□□□□ 0.19
USP53-208ENST00000514305 RAG2P55895 527 aa16.22■□□□□ 0.19
USP53-208ENST00000514305 CBX3Q13185 183 aa16.22■□□□□ 0.19
USP53-208ENST00000514305 UTF1Q5T230 341 aa16.22■□□□□ 0.19
USP53-208ENST00000514305 ZNF833PQ6ZTB9 187 aa16.22■□□□□ 0.19
USP53-208ENST00000514305 SECTM1Q8WVN6 248 aa16.22■□□□□ 0.19
USP53-208ENST00000514305 MOB3AQ96BX8 217 aa16.22■□□□□ 0.19
USP53-208ENST00000514305 SCGB3A2Q96PL1 93 aa16.22■□□□□ 0.19
USP53-208ENST00000514305 SLC5A7Q9GZV3 580 aa16.22■□□□□ 0.19
USP53-208ENST00000514305 RAB18Q9NP72 206 aa16.22■□□□□ 0.19
USP53-208ENST00000514305 IGHV1-3A0A0C4DH29 117 aa16.21■□□□□ 0.19
USP53-208ENST00000514305 NAP1L6A6NFF2 107 aa16.21■□□□□ 0.19
USP53-208ENST00000514305 J3QRK9 145 aa16.21■□□□□ 0.19
USP53-208ENST00000514305 M0QYG6 137 aa16.21■□□□□ 0.19
USP53-208ENST00000514305 CD1BP29016 333 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms