RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 ZNF501Q96CX3 271 aaPredicted RBP9.72□□□□□ -0.85
TCOF1-211ENST00000513346 TMEM204Q9BSN7 226 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 LRFN3Q9BTN0 628 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 WDR54Q9H977 334 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 ZNF835Q9Y2P0 537 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 SMIM10L1P0DMW3 83 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 PPOXP50336 477 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 RBM11P57052 281 aaKnown RBP9.72□□□□□ -0.85
TCOF1-211ENST00000513346 NHLRC2Q8NBF2 726 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 SMIM10Q96HG1 83 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 RNF2Q99496 336 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 OR1A1Q9P1Q5 309 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 GREB1Q4ZG55 1949 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 PDCD11Q14690 1871 aaKnown RBP9.72□□□□□ -0.85
TCOF1-211ENST00000513346 PRR32B1ATL7 298 aa9.71□□□□□ -0.85
TCOF1-211ENST00000513346 K7N7A8 449 aa9.71□□□□□ -0.85
TCOF1-211ENST00000513346 AMBPP02760 352 aa9.71□□□□□ -0.85
TCOF1-211ENST00000513346 PATE4P0C8F1 98 aa9.71□□□□□ -0.85
TCOF1-211ENST00000513346 CCL3P10147 92 aa9.71□□□□□ -0.85
TCOF1-211ENST00000513346 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.71□□□□□ -0.85
TCOF1-211ENST00000513346 LINC00114Q6XXX2 140 aa9.71□□□□□ -0.85
TCOF1-211ENST00000513346 OR2Z1Q8NG97 314 aa9.71□□□□□ -0.85
TCOF1-211ENST00000513346 OR4P4Q8NGL7 312 aa9.71□□□□□ -0.85
TCOF1-211ENST00000513346 RCC1LQ96I51 464 aaKnown RBP9.71□□□□□ -0.85
TCOF1-211ENST00000513346 LINC00614P0C842 121 aa9.71□□□□□ -0.85
TCOF1-211ENST00000513346 ZNF883P0CG24 379 aa9.71□□□□□ -0.85
TCOF1-211ENST00000513346 RTL8BQ17RB0 113 aa9.71□□□□□ -0.85
TCOF1-211ENST00000513346 DCAF10Q5QP82 559 aa9.71□□□□□ -0.85
TCOF1-211ENST00000513346 SMIM12Q96EX1 92 aa9.71□□□□□ -0.85
TCOF1-211ENST00000513346 COMMD5Q9GZQ3 224 aa9.71□□□□□ -0.85
TCOF1-211ENST00000513346 TECRQ9NZ01 308 aaKnown RBP9.71□□□□□ -0.85
TCOF1-211ENST00000513346 INTS1Q8N201 2190 aaKnown RBP9.71□□□□□ -0.85
TCOF1-211ENST00000513346 IFITM10A6NMD0 228 aa9.71□□□□□ -0.86
TCOF1-211ENST00000513346 FCGR3BO75015 233 aa9.71□□□□□ -0.86
TCOF1-211ENST00000513346 HTR1DP28221 377 aa9.71□□□□□ -0.86
TCOF1-211ENST00000513346 GPR146Q96CH1 333 aa9.71□□□□□ -0.86
TCOF1-211ENST00000513346 DMRTA2Q96SC8 542 aa9.71□□□□□ -0.86
TCOF1-211ENST00000513346 ANK1P16157 1881 aa9.71□□□□□ -0.86
TCOF1-211ENST00000513346 TRBV24-1A0A075B6N3 115 aa9.71□□□□□ -0.86
TCOF1-211ENST00000513346 FAM90A27PA6NNH2 459 aa9.71□□□□□ -0.86
TCOF1-211ENST00000513346 LYPD3O95274 346 aa9.71□□□□□ -0.86
TCOF1-211ENST00000513346 HLA-DQA1P01909 254 aa9.71□□□□□ -0.86
TCOF1-211ENST00000513346 EGR4Q05215 589 aa9.71□□□□□ -0.86
TCOF1-211ENST00000513346 PSG5Q15238 335 aa9.71□□□□□ -0.86
TCOF1-211ENST00000513346 SLC25A45Q8N413 288 aa9.71□□□□□ -0.86
TCOF1-211ENST00000513346 WDYHV1Q96HA8 205 aa9.71□□□□□ -0.86
TCOF1-211ENST00000513346 POM121L2Q96KW2 1035 aa9.71□□□□□ -0.86
TCOF1-211ENST00000513346 MAGEA5P43359 124 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 CXorf67Q86X51 503 aaPredicted RBP9.7□□□□□ -0.86
TCOF1-211ENST00000513346 C9orf40Q8IXQ3 194 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 Q96M66 194 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 OR6C3Q9NZP0 311 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 BCL3P20749 454 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 ERVFRD-1P60508 538 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 GABRA6Q16445 453 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 TRAT1Q6PIZ9 186 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 OR8I2Q8N0Y5 310 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 ALKBH7Q9BT30 221 aaPredicted RBP9.7□□□□□ -0.86
TCOF1-211ENST00000513346 HES7Q9BYE0 225 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 RHBDL1O75783 438 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 SSMEM1Q8WWF3 244 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 TMEM242Q9NWH2 141 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 SPTBN1Q01082 2364 aaKnown RBP9.7□□□□□ -0.86
TCOF1-211ENST00000513346 A0A1B0GW64 132 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 CIDEAO60543 219 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 IL11P20809 199 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 CA6P23280 308 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 GNB2P62879 340 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 CCL20P78556 96 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 TMEM108Q6UXF1 575 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 ABHD14AQ9BUJ0 271 aa9.7□□□□□ -0.86
TCOF1-211ENST00000513346 OR5B21A6NL26 309 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 CTSBP07858 339 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 C10orf91Q5T1B1 145 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 OR2V2Q96R30 315 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 QTRT1Q9BXR0 403 aaKnown RBP9.69□□□□□ -0.86
TCOF1-211ENST00000513346 AICDAQ9GZX7 198 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 CLN8Q9UBY8 286 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 PSG11Q9UQ72 335 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 P2RY6Q15077 328 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 MST1LQ2TV78 715 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 SF3B5Q9BWJ5 86 aaKnown RBP9.69□□□□□ -0.86
TCOF1-211ENST00000513346 GAL3ST2Q9H3Q3 398 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 FBLN5Q9UBX5 448 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 HSPB8Q9UJY1 196 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 LHFPL6Q9Y693 200 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 ROS1P08922 2347 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 DPRXA6NFQ7 191 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 MARCH11A6NNE9 402 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 CCL2P13500 99 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 KLF3P57682 345 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-211ENST00000513346 C3AR1Q16581 482 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 SLC25A34Q6PIV7 304 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 LRRC75AQ8NAA5 344 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 ZBTB34Q8NCN2 500 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 R3HDM4Q96D70 268 aa9.69□□□□□ -0.86
TCOF1-211ENST00000513346 TRGV10A0A0A0MS01 117 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 TRBV9A0A0B4J1U6 114 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 ISLRO14498 428 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 PGLYRP1O75594 196 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms