RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 FAM90A2PQ658T7 463 aa12.45□□□□□ -0.42
DDR1-271ENST00000513240 TPRX1Q8N7U7 411 aa12.45□□□□□ -0.42
DDR1-271ENST00000513240 CLDND2Q8NHS1 167 aa12.45□□□□□ -0.42
DDR1-271ENST00000513240 C1QTNF5Q9BXJ0 243 aa12.45□□□□□ -0.42
DDR1-271ENST00000513240 ERRFI1Q9UJM3 462 aaPredicted RBP12.45□□□□□ -0.42
DDR1-271ENST00000513240 RBM7Q9Y580 266 aaKnown RBP12.45□□□□□ -0.42
DDR1-271ENST00000513240 TPRP12270 2363 aaKnown RBP12.45□□□□□ -0.42
DDR1-271ENST00000513240 TMEM50AO95807 157 aa12.45□□□□□ -0.42
DDR1-271ENST00000513240 ACP1P24666 158 aa12.45□□□□□ -0.42
DDR1-271ENST00000513240 MPV17LQ2QL34 196 aa12.45□□□□□ -0.42
DDR1-271ENST00000513240 COL5A1-AS1Q5SY13 56 aa12.45□□□□□ -0.42
DDR1-271ENST00000513240 HES3Q5TGS1 186 aa12.45□□□□□ -0.42
DDR1-271ENST00000513240 CST9LP1Q5W188 147 aa12.45□□□□□ -0.42
DDR1-271ENST00000513240 ZNF826PQ6ZT77 177 aa12.45□□□□□ -0.42
DDR1-271ENST00000513240 MDP1Q86V88 176 aa12.45□□□□□ -0.42
DDR1-271ENST00000513240 ZDHHC23Q8IYP9 409 aa12.45□□□□□ -0.42
DDR1-271ENST00000513240 Q8NFD4 153 aa12.45□□□□□ -0.42
DDR1-271ENST00000513240 REPIN1Q9BWE0 567 aaKnown RBP12.45□□□□□ -0.42
DDR1-271ENST00000513240 CEP295Q9C0D2 2601 aa12.45□□□□□ -0.42
DDR1-271ENST00000513240 USF3Q68DE3 2245 aa12.45□□□□□ -0.42
DDR1-271ENST00000513240 OTOGLQ3ZCN5 2332 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 IGSF23A1L1A6 192 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 CDX4O14627 284 aaPredicted RBP12.44□□□□□ -0.42
DDR1-271ENST00000513240 OR10J1P30954 320 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 CCL11P51671 97 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 OR1K1Q8NGR3 316 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 PCGF1Q9BSM1 259 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 TACC2O95359 2948 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 C19orf67A6NJJ6 358 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 B4DEV8 164 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 ZNF154Q13106 437 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 LTC4SQ16873 150 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 TMEM256Q8N2U0 113 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 MOB3AQ96BX8 217 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 MS4A10Q96PG2 267 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 MIEN1Q9BRT3 115 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 MSL2Q9HCI7 577 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 SLC22A20A6NK97 555 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 PPP5D1E7EU14 171 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 NKX2-8O15522 239 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 IAPPP10997 89 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 CD59P13987 128 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 CCKARP32238 428 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 TMEM267Q0VDI3 215 aaPredicted RBP12.44□□□□□ -0.42
DDR1-271ENST00000513240 ADIRFQ15847 76 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 MKXQ8IYA7 352 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 LYG1Q8N1E2 194 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 CNEP1R1Q8N9A8 125 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 RNF24Q9Y225 148 aa12.44□□□□□ -0.42
DDR1-271ENST00000513240 M0QZ24 198 aa12.43□□□□□ -0.42
DDR1-271ENST00000513240 CDIPTO14735 213 aa12.43□□□□□ -0.42
DDR1-271ENST00000513240 ST8SIA3O43173 380 aa12.43□□□□□ -0.42
DDR1-271ENST00000513240 NUPR1O60356 82 aa12.43□□□□□ -0.42
DDR1-271ENST00000513240 ARG2P78540 354 aa12.43□□□□□ -0.42
DDR1-271ENST00000513240 MMDQ15546 238 aa12.43□□□□□ -0.42
DDR1-271ENST00000513240 TMEM164Q5U3C3 297 aa12.43□□□□□ -0.42
DDR1-271ENST00000513240 C16orf82Q7Z2V1 217 aa12.43□□□□□ -0.42
DDR1-271ENST00000513240 LGI3Q8N145 548 aa12.43□□□□□ -0.42
DDR1-271ENST00000513240 TMEM171Q8WVE6 324 aa12.43□□□□□ -0.42
DDR1-271ENST00000513240 C18orf12Q96KH6 178 aa12.43□□□□□ -0.42
DDR1-271ENST00000513240 NKX6-3A6NJ46 265 aa12.43□□□□□ -0.42
DDR1-271ENST00000513240 WNT9BO14905 357 aa12.43□□□□□ -0.42
DDR1-271ENST00000513240 SELENOTP62341 195 aa12.43□□□□□ -0.42
DDR1-271ENST00000513240 EWSR1Q01844 656 aaKnown RBP eCLIP12.43□□□□□ -0.42
DDR1-271ENST00000513240 SPRR3Q9UBC9 169 aa12.43□□□□□ -0.42
DDR1-271ENST00000513240 KCNS2Q9ULS6 477 aa12.43□□□□□ -0.42
DDR1-271ENST00000513240 PKDREJQ9NTG1 2253 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 CHST1O43916 411 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 SP9P0CG40 484 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 DTYMKP23919 212 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 PLP2Q04941 152 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 RTP5Q14D33 572 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 ALKBH7Q9BT30 221 aaPredicted RBP12.42□□□□□ -0.42
DDR1-271ENST00000513240 GLRX2Q9NS18 164 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 B4GALT7Q9UBV7 327 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 HEATR1Q9H583 2144 aaKnown RBP12.42□□□□□ -0.42
DDR1-271ENST00000513240 ACACAQ13085 2346 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 WDR1O75083 606 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 NDUFB8O95169 186 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 PSG2P11465 335 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 PDLIM4P50479 330 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 SPINK9Q5DT21 86 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 RIPPLY2Q5TAB7 128 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 STPG4Q8N801 248 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 OR5C1Q8NGR4 320 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 C10orf35Q96D05 121 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 ACY3Q96HD9 319 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 SLC35E1Q96K37 410 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 POM121L2Q96KW2 1035 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 Q9N2K0 584 aa12.42□□□□□ -0.42
DDR1-271ENST00000513240 TRAV24A0A0B4J272 114 aa12.41□□□□□ -0.42
DDR1-271ENST00000513240 SP1P08047 785 aa12.41□□□□□ -0.42
DDR1-271ENST00000513240 NKX2-1P43699 371 aaPredicted RBP12.41□□□□□ -0.42
DDR1-271ENST00000513240 TMEM170AQ8WVE7 144 aa12.41□□□□□ -0.42
DDR1-271ENST00000513240 SDF2L1Q9HCN8 221 aa12.41□□□□□ -0.42
DDR1-271ENST00000513240 TUBG2Q9NRH3 451 aa12.41□□□□□ -0.42
DDR1-271ENST00000513240 SVEP1Q4LDE5 3571 aa12.41□□□□□ -0.42
DDR1-271ENST00000513240 TMEM265A0A087WTH1 108 aa12.41□□□□□ -0.42
DDR1-271ENST00000513240 HMGB3O15347 200 aaKnown RBP12.41□□□□□ -0.42
DDR1-271ENST00000513240 DYNLT3P51808 116 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms