RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 TCTEX1D1Q8N7M0 179 aa8.57□□□□□ -1.04
PDLIM5-217ENST00000512274 OR52B4Q8NGK2 314 aa8.57□□□□□ -1.04
PDLIM5-217ENST00000512274 RTN4IP1Q8WWV3 396 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-217ENST00000512274 IL22RA2Q969J5 263 aa8.57□□□□□ -1.04
PDLIM5-217ENST00000512274 DACT3Q96B18 629 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-217ENST00000512274 MS4A7Q9GZW8 240 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-217ENST00000512274 UBE2J1Q9Y385 318 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-217ENST00000512274 LINC00312Q9Y6C7 94 aa8.57□□□□□ -1.04
PDLIM5-217ENST00000512274 TRBV23-1A0A0A0MS06 115 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 A0A1B0GUS0 222 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 MDFIC2A0A1B0GVS7 189 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 FAM181BA6NEQ2 426 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 ZNF729A6NN14 1252 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 G3V3Q6 166 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 YPEL1O60688 119 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 IGHV2-5P01817 119 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 HBZP02008 142 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 NFYAP23511 347 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 GLIPR1P48060 266 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 EIF2B2P49770 351 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 LUMP51884 338 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 H2BFSP57053 126 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 FGL1Q08830 312 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 LIN54Q6MZP7 749 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 OR10V1Q8NGI7 309 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 OR13A1Q8NGR1 328 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 OR4F5Q8NH21 305 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 EDARADDQ8WWZ3 215 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 TMEM56Q96MV1 263 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 YPEL2Q96QA6 119 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 NMES1Q9C002 83 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 TMEM56-RWDD3S4R434 201 aa8.56□□□□□ -1.04
PDLIM5-217ENST00000512274 TRGV10A0A0A0MS01 117 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 IGKV1D-13A0A0B4J2D9 117 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 KBTBD11-OT1A0A1B0GTJ5 212 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 hADV38S2A0JD32 116 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 HMSDA8MTL9 139 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 H0Y980 276 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 CLDN34H7C241 214 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 BET1O15155 118 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 MPPED1O15442 326 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 IGHV2-70P01814 119 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 RBP4P02753 201 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 IGKV1-13P0DP09 117 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 AKR1C4P17516 323 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 VAMP1P23763 118 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 GATA3P23771 443 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 UCP1P25874 307 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 GMFBP60983 142 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 IL15RAQ13261 267 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 TMEM187Q14656 261 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 ABCA11PQ4W5N1 156 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 NLRC3Q7RTR2 1065 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 C8orf31Q8N9H6 132 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 ZNRF1Q8ND25 227 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 OR5T2Q8NGG2 359 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 TOMM40LQ969M1 308 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 TMEM222Q9H0R3 208 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 RDH8Q9NYR8 311 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 CLN8Q9UBY8 286 aa8.55□□□□□ -1.04
PDLIM5-217ENST00000512274 PLXNB1O43157 2135 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 DSCAML1Q8TD84 2053 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 IGHV3OR15-7A0A075B7D8 119 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 CLPSL1A2RUU4 121 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 HOXA3O43365 443 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 ZNF205O95201 554 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 CDS2O95674 445 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 IGLV2-14P01704 120 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 RPA2P15927 270 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 F2RP25116 425 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 RELBQ01201 579 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 EIF4EBP1Q13541 118 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 C17orf58Q2M2W7 97 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 ANKRD55Q3KP44 614 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 LRRC10Q5BKY1 277 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 FAM201AQ5SY85 155 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 TMEM65Q6PI78 240 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 LIAT1Q6ZQX7 453 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 ZNF818PQ6ZRF7 136 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 TCF23Q7RTU1 214 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 REC114Q7Z4M0 266 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 LGI3Q8N145 548 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 ZNF645Q8N7E2 425 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 OR2T35Q8NGX2 323 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 C8orf46Q8TAG6 207 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 GLYATL2Q8WU03 294 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 CCL17Q92583 94 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 ARL11Q969Q4 196 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 AGMATQ9BSE5 352 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 SLC5A7Q9GZV3 580 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 CALYQ9NYX4 217 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 C1RLQ9NZP8 487 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 SLC25A10Q9UBX3 287 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 TMED3Q9Y3Q3 217 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 RNF114Q9Y508 228 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 AUP1Q9Y679 476 aa8.54□□□□□ -1.04
PDLIM5-217ENST00000512274 A0A087X0M5 115 aa8.53□□□□□ -1.04
PDLIM5-217ENST00000512274 TEX13DA0A0J9YY54 714 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-217ENST00000512274 C3orf85A0A1B0GTC6 90 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms