RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SDK2Q58EX2 2172 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 ENTPD8Q5MY95 495 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 LCN8Q6JVE9 175 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 TIFABQ6ZNK6 161 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 SPACA3Q8IXA5 215 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 PAQR4Q8N4S7 273 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 GPR119Q8TDV5 335 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 SLC25A43Q8WUT9 341 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 MBD3L1Q8WWY6 194 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 GPR82Q96P67 336 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR2A5Q96R48 311 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 FAAP24Q9BTP7 215 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 PRO1933Q9H354 126 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 BTRCQ9Y297 605 aa4.2□□□□□ -1.74
TRAPPC11-208ENST00000511955 A0A0G2JLM5 398 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 A0A1B0GTH9 108 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 LOC101059948A0A1B0GTJ6 334 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 C7orf66A4D0T2 115 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 COLCA2A8K830 154 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 G3V2L1 256 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 GABRPO00591 440 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 WISP2O76076 250 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 TSPAN15O95858 294 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 PLA2G1BP04054 148 aaKnown RBP4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 SLC35G6P0C7Q6 338 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 CD79AP11912 226 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 HOXA5P20719 270 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 GADD45AP24522 165 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR1E2P47887 323 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 UBE2E1P51965 193 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 DLX1P56177 255 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 SELENOWP63302 87 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 CDK6Q00534 326 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 ACOT6Q3I5F7 207 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 Q6ZVH6 145 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 VN1R4Q7Z5H5 301 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 HOGA1Q86XE5 327 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 FTMTQ8N4E7 242 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR2K2Q8NGT1 345 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZPLD1Q8TCW7 415 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 GMPPAQ96IJ6 420 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 UBE2E2Q96LR5 201 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 NDFIP1Q9BT67 221 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 DCTN5Q9BTE1 182 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 DUSP21Q9H596 190 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 VSIRQ9H7M9 311 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 ASIC5Q9NY37 505 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 PCTPQ9UKL6 214 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 LAMTOR2Q9Y2Q5 125 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 EXOSC1Q9Y3B2 195 aaKnown RBP4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 SIRT4Q9Y6E7 314 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 PTPRQQ9UMZ3 2332 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 SEC16AO15027 2179 aa4.19□□□□□ -1.74
TRAPPC11-208ENST00000511955 SCN3AQ9NY46 2000 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 ADAMTS20P59510 1910 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR5B21A6NL26 309 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 IDSB3KWA1 339 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 C4orf51C9J302 202 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 K7EMT4 169 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 SOX14O95416 240 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 PFN1P07737 140 aaKnown RBP4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 LIFP15018 202 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 RPL7P18124 248 aaKnown RBP4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 WT1P19544 449 aaPredicted RBP4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 CERS1P27544 350 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 HBA1P69905 142 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 SLC35A2P78381 396 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 TIMM50Q3ZCQ8 353 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF678Q5SXM1 525 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZFAND6Q6FIF0 208 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 LAIR2Q6ISS4 152 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 FAAP20Q6NZ36 180 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 C6orf120Q7Z4R8 191 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 PNKDQ8N490 385 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR2G2Q8NGZ5 317 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 CT55Q8WUE5 264 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 F2RL3Q96RI0 385 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 AGMATQ9BSE5 352 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 DOHHQ9BU89 302 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 C20orf85Q9H1P6 137 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 KCNJ16Q9NPI9 418 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 PRNDQ9UKY0 176 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 SPTA1P02549 2419 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 A0A1B0GX78 115 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 UBFD1O14562 309 aaKnown RBP4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 LYRM1O43325 122 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 CXCL13O43927 109 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 MMP23AO75900 390 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 SIX6O95475 246 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 CT45A6P0DMU7 189 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 CT45A5P0DMU8 189 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 CT45A7P0DMV0 189 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 CD99P14209 185 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 NPY1RP25929 384 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 CHATP28329 748 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 FOXA1P55317 472 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 HIST1H3AP68431 136 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 CX3CL1P78423 397 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 H3F3AP84243 136 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 FOXF2Q12947 444 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms