RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 MPPED1O15442 326 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 SPINK9Q5DT21 86 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 LYZL2Q7Z4W2 148 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 CORO2AQ92828 525 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 TBX15Q96SF7 602 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 MRPL20Q9BYC9 149 aaKnown RBP6.56□□□□□ -1.36
SMAD1-209ENST00000511125 MED28Q9H204 178 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 TAS2R3Q9NYW6 316 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 JPT1Q9UK76 154 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 MGAT4AQ9UM21 535 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 AUP1Q9Y679 476 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 HIVEP1P15822 2718 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 F8P00451 2351 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 C9orf170A2RU37 121 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 C5orf51A6NDU8 294 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 KCNAB3O43448 404 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 APELAP0DMC3 54 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 HTD2P86397 168 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 HES1Q14469 280 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 SPAG16Q8N0X2 631 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 DYNAPQ8N1N2 210 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 ZFAND1Q8TCF1 268 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 CHAC2Q8WUX2 184 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 TAF15Q92804 592 aaKnown RBP eCLIP6.56□□□□□ -1.36
SMAD1-209ENST00000511125 TMEM186Q96B77 213 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 CLEC7AQ9BXN2 247 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 SESN1Q9Y6P5 492 aa6.56□□□□□ -1.36
SMAD1-209ENST00000511125 C3orf85A0A1B0GTC6 90 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 hCG_1809904A0A1W2PP81 198 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 A0A1W2PPE2 198 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 A0A1W2PPH5 198 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 A0A1W2PR64 198 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 A0A1W2PRV1 198 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 B4DSR2 109 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 YPEL1O60688 119 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 RBMXL2O75526 392 aaKnown RBP6.55□□□□□ -1.36
SMAD1-209ENST00000511125 RGS11O94810 467 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 SCGB1D2O95969 90 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 SLC25A16P16260 332 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 TNCP24821 2201 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 CD34P28906 385 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 NKX2-5P52952 324 aaPredicted RBP6.55□□□□□ -1.36
SMAD1-209ENST00000511125 TMEM268Q5VZI3 342 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 TRAT1Q6PIZ9 186 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 SLC38A6Q8IZM9 456 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 LHFPL5Q8TAF8 219 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 EDARADDQ8WWZ3 215 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 RITA1Q96K30 269 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 YPEL2Q96QA6 119 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 FYTTD1Q96QD9 318 aaKnown RBP6.55□□□□□ -1.36
SMAD1-209ENST00000511125 CLCC1Q96S66 551 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 SLC2A8Q9NY64 477 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 MGAT4CQ9UBM8 478 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 SH2D7A6NKC9 451 aaPredicted RBP6.55□□□□□ -1.36
SMAD1-209ENST00000511125 CREBL2O60519 120 aaPredicted RBP6.55□□□□□ -1.36
SMAD1-209ENST00000511125 SLC22A5O76082 557 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 CRYZL1O95825 349 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 IGKV1-16P04430 117 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 SERPINE2P07093 398 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 IGHV4-31P0DP07 118 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 G6PCP35575 357 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 FBLN7Q53RD9 439 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 TMEM128Q5BJH2 165 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 Q6ZS49 121 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 SLC25A42Q86VD7 318 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 ODF3L1Q8IXM7 274 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 BCL6BQ8N143 479 aaPredicted RBP6.55□□□□□ -1.36
SMAD1-209ENST00000511125 LY6G5BQ8NDX9 201 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 OR9G1Q8NH87 305 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 RPEQ96AT9 228 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 PDCD10Q9BUL8 212 aa6.55□□□□□ -1.36
SMAD1-209ENST00000511125 ZNF107Q9UII5 783 aaPredicted RBP6.55□□□□□ -1.36
SMAD1-209ENST00000511125 CR1P17927 2039 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 IFNA2P01563 188 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 CTSDP07339 412 aaPredicted RBP6.54□□□□□ -1.36
SMAD1-209ENST00000511125 HOXB4P17483 251 aaPredicted RBP6.54□□□□□ -1.36
SMAD1-209ENST00000511125 LPAR6P43657 344 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 RPS16P62249 146 aaKnown RBP6.54□□□□□ -1.36
SMAD1-209ENST00000511125 PIP4P2Q8N4L2 257 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 C12orf45Q8N5I9 185 aaPredicted RBP6.54□□□□□ -1.36
SMAD1-209ENST00000511125 ZNF645Q8N7E2 425 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 BVESQ8NE79 360 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 RSRP1Q9BUV0 290 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 NAA60Q9H7X0 242 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 RANGRFQ9HD47 186 aaPredicted RBP6.54□□□□□ -1.36
SMAD1-209ENST00000511125 KCNIP3Q9Y2W7 256 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 INSIG2Q9Y5U4 225 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 NF1P21359 2839 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 RAB29O14966 203 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 MYOD1P15172 320 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 SAA4P35542 130 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 BCAP31P51572 246 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 AKR1C2P52895 323 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 DSCR9P59020 149 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 PAX2Q02962 417 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 LY6EQ16553 131 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 CR1LQ2VPA4 569 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 C11orf87Q6NUJ2 197 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 LYG2Q86SG7 212 aa6.54□□□□□ -1.36
SMAD1-209ENST00000511125 ZNF695Q8IW36 515 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms