RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 MADCAM1Q13477 382 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 C17orf58Q2M2W7 97 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 FAM106AQ4KMX7 169 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 CTRB2Q6GPI1 263 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 MBOAT2Q6ZWT7 520 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 MOB3BQ86TA1 216 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 ANGPTL5Q86XS5 388 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 TMEM104Q8NE00 496 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 OR4C15Q8NGM1 316 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 OR4K13Q8NH42 304 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 PKNOX2Q96KN3 472 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 ERMAPQ96PL5 475 aaPredicted RBP4.25□□□□□ -1.73
USP53-206ENST00000510737 GAL3ST2Q9H3Q3 398 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 VIPAS39Q9H9C1 493 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 PLEKHA1Q9HB21 404 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 TAS2R3Q9NYW6 316 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 DNAJC27Q9NZQ0 273 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 MRM2Q9UI43 246 aaKnown RBP4.25□□□□□ -1.73
USP53-206ENST00000510737 PSG11Q9UQ72 335 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
USP53-206ENST00000510737 FLG2Q5D862 2391 aaPredicted RBP4.24□□□□□ -1.73
USP53-206ENST00000510737 DHRS12A0PJE2 317 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 OR5B21A6NL26 309 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 ZNF878C9JN71 531 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 J3QT63 122 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 ZNF593O00488 134 aaPredicted RBP4.24□□□□□ -1.73
USP53-206ENST00000510737 SNX3O60493 162 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 CGB3P0DN86 165 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 CGB7P0DN87 165 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 GABRR1P24046 479 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 OR3A1P47881 315 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 GZMMP51124 257 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 SLC18A1P54219 525 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 SYNJ2BPP57105 145 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 CYP51A1Q16850 503 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 DEFB135Q30KP9 77 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 ZNF730Q6ZMV8 503 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 LAX1Q8IWV1 398 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 RNF148Q8N7C7 305 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 OR51L1Q8NGJ5 315 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 RASSF5Q8WWW0 418 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 RCN3Q96D15 328 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 OR52B2Q96RD2 323 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 AMELYQ99218 206 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 RGCCQ9H4X1 137 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 SLC25A19Q9HC21 320 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 DNAJC4Q9NNZ3 241 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 MTCH1Q9NZJ7 389 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 U3KQV3 271 aa4.24□□□□□ -1.73
USP53-206ENST00000510737 IGLV2-18A0A075B6J9 118 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 TRGV10A0A0A0MS01 117 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 IGHV7-81A0A0B4J1V7 117 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 A0A1W2PPE3 182 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 PQLC2LA1A4F0 135 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 MOSP00540 346 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 GAPDHP04406 335 aaKnown RBP4.23□□□□□ -1.73
USP53-206ENST00000510737 HSD11B1P28845 292 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 GPR183P32249 361 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 KIR2DS2P43631 304 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 MFAP2P55001 183 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 MTPNP58546 118 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 GRB2P62993 217 aaKnown RBP4.23□□□□□ -1.73
USP53-206ENST00000510737 AESQ08117 197 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 ZNF816Q0VGE8 651 aaPredicted RBP4.23□□□□□ -1.73
USP53-206ENST00000510737 TRAM2Q15035 370 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 DEFB114Q30KQ6 69 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 C2orf83Q53S99 150 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 TEX30Q5JUR7 227 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 ZNF573Q86YE8 665 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 OR9Q2Q8NGE9 314 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 OR8H1Q8NGG4 311 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 OR4D6Q8NGJ1 314 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 OR2K2Q8NGT1 345 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 HAVCR2Q8TDQ0 301 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 LZICQ8WZA0 190 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 PRRC1Q96M27 445 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 TEX12Q9BXU0 123 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 KAT8Q9H7Z6 458 aaKnown RBP4.23□□□□□ -1.73
USP53-206ENST00000510737 PARP11Q9NR21 331 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 GSN-AS1Q9NRJ2 163 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 PIGLQ9Y2B2 252 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 POLDIP2Q9Y2S7 368 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 AMMECR1Q9Y4X0 333 aaPredicted RBP4.23□□□□□ -1.73
USP53-206ENST00000510737 DSCAML1Q8TD84 2053 aa4.23□□□□□ -1.73
USP53-206ENST00000510737 KBTBD11-OT1A0A1B0GTJ5 212 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 LGALS9O00182 355 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 HSD17B6O14756 317 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 ARPC3O15145 178 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 UBDO15205 165 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 HAND1O96004 215 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 APOC1P02654 83 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 CALCBP10092 127 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 ATP6V1B1P15313 513 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 C4BPBP20851 252 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 ZP3P21754 424 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 CD1BP29016 333 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 BLVRBP30043 206 aaPredicted RBP4.22□□□□□ -1.73
USP53-206ENST00000510737 VHLP40337 213 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 PTGFRP43088 359 aa4.22□□□□□ -1.73
USP53-206ENST00000510737 OMPP47874 163 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms