RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 MRGPRFQ96AM1 343 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 PNRC2Q9NPJ4 139 aaKnown RBP4.3□□□□□ -1.72
PHF3-210ENST00000509876 AKIP1Q9NQ31 210 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 TBL2Q9Y4P3 447 aaKnown RBP4.3□□□□□ -1.72
PHF3-210ENST00000509876 TMEM131Q92545 1883 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 C12orf77C9JDV5 145 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 WNT2P09544 360 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 APELAP0DMC3 54 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 RCC1P18754 421 aaPredicted RBP4.3□□□□□ -1.72
PHF3-210ENST00000509876 FAM209BQ5JX69 171 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 OR1B1Q8NGR6 318 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 Q8TCH9 128 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 PFDN5Q99471 154 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 TMEM208Q9BTX3 173 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 SPTBP11277 2137 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 TRAV30A0A087WSZ9 112 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 CGAP01215 116 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 PLA2G2AP14555 144 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 RELQ04864 619 aaPredicted RBP4.3□□□□□ -1.72
PHF3-210ENST00000509876 ZNF273Q14593 569 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 LSM10Q969L4 123 aaKnown RBP4.3□□□□□ -1.72
PHF3-210ENST00000509876 BIN3Q9NQY0 253 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 PRELID1Q9Y255 219 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 ASXL3Q9C0F0 2248 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 PIN1P1O15428 100 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 RHOBP62745 196 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 BAK1Q16611 211 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 CD200R1LQ6Q8B3 271 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 OSR1Q8TAX0 266 aaPredicted RBP4.3□□□□□ -1.72
PHF3-210ENST00000509876 METTL26Q96S19 204 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 AHCTF1Q8WYP5 2266 aa4.3□□□□□ -1.72
PHF3-210ENST00000509876 TCRBV4S1A1TA0A5B7 111 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 SYNGR2O43760 224 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 LILRA1O75019 489 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 HTD2P86397 168 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 TMEM182Q6ZP80 229 aaPredicted RBP4.29□□□□□ -1.72
PHF3-210ENST00000509876 PPP1R27Q86WC6 154 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 OR52M1Q8NGK5 317 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 SSMEM1Q8WWF3 244 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 CDC42EP3Q9UKI2 254 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 MUC6Q6W4X9 2439 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 NPFFO15130 113 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 TRGV3P03979 118 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 CCL3L1P16619 93 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 MFAP4P55083 255 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 PXDC1Q5TGL8 231 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 ACOT7LQ6ZUV0 252 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 SSX3Q99909 188 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 GPR61Q9BZJ8 451 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 HEATR5BQ9P2D3 2071 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 NUP214P35658 2090 aaPredicted RBP4.29□□□□□ -1.72
PHF3-210ENST00000509876 H3BP45 60 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 CD55P08174 381 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 IGFBP3P17936 291 aaPredicted RBP4.29□□□□□ -1.72
PHF3-210ENST00000509876 NPY1RP25929 384 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 COL8A1P27658 744 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 TMEM50BP56557 158 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 DHRS2Q13268 280 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 EXOSC2Q13868 293 aaKnown RBP4.29□□□□□ -1.72
PHF3-210ENST00000509876 MOGAT2Q3SYC2 334 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 FAM122CQ6P4D5 195 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 DRAM1Q8N682 238 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 OR52B4Q8NGK2 314 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 ARPC1AQ92747 370 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 GAFA1Q96PS6 74 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 ATP5SQ99766 215 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 QTRT1Q9BXR0 403 aaKnown RBP4.29□□□□□ -1.72
PHF3-210ENST00000509876 TMEM140Q9NV12 185 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 PEMTQ9UBM1 199 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 RABAC1Q9UI14 185 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 KCNK7Q9Y2U2 307 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 MOB4Q9Y3A3 225 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 MMP24Q9Y5R2 645 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 FAM186AA6NE01 2351 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 SHISA9B4DS77 424 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 SOX15O60248 233 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 GRNP28799 593 aaKnown RBP4.29□□□□□ -1.72
PHF3-210ENST00000509876 SPCS3P61009 180 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 FBXL19-AS1Q494R0 122 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 CLEC18BQ6UXF7 455 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 C3orf56Q8N813 242 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 RNF141Q8WVD5 230 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 MS4A10Q96PG2 267 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 MMP26Q9NRE1 261 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 SLC45A2Q9UMX9 530 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 SEC16AO15027 2179 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 XKRY2A2RUG3 117 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 NBR2O15453 112 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 YPEL1O60688 119 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 PGLYRP1O75594 196 aaPredicted RBP4.29□□□□□ -1.72
PHF3-210ENST00000509876 GATA4P43694 442 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 GALR1P47211 349 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 RAB4BP61018 213 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 ZNF497Q6ZNH5 498 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 CLDND2Q8NHS1 167 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 MRPL30Q8TCC3 161 aaKnown RBP4.29□□□□□ -1.72
PHF3-210ENST00000509876 YIPF5Q969M3 257 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 YPEL2Q96QA6 119 aa4.29□□□□□ -1.72
PHF3-210ENST00000509876 RPUSD1Q9UJJ7 312 aaKnown RBP4.29□□□□□ -1.72
PHF3-210ENST00000509876 GPR179Q6PRD1 2367 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms