RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 LAMP3Q9UQV4 416 aa15.03■□□□□ -0
CCHCR1-228ENST00000509552 URGCP-MRPS24S4R325 110 aa15.03■□□□□ -0
CCHCR1-228ENST00000509552 PRR33A8MZF0 331 aa15.03■□□□□ -0
CCHCR1-228ENST00000509552 CECR9P0C854 216 aa15.03■□□□□ -0
CCHCR1-228ENST00000509552 P0C879 139 aa15.03■□□□□ -0
CCHCR1-228ENST00000509552 COL10A1Q03692 680 aa15.03■□□□□ -0
CCHCR1-228ENST00000509552 KIAA0141Q14154 515 aaPredicted RBP15.03■□□□□ -0
CCHCR1-228ENST00000509552 ZNF343Q6P1L6 599 aa15.03■□□□□ -0
CCHCR1-228ENST00000509552 SSX7Q7RTT5 188 aa15.03■□□□□ -0
CCHCR1-228ENST00000509552 C5orf30Q96GV9 206 aa15.03■□□□□ -0
CCHCR1-228ENST00000509552 TAAR6Q96RI8 345 aa15.03■□□□□ -0
CCHCR1-228ENST00000509552 CLDN14O95500 239 aa15.02■□□□□ -0
CCHCR1-228ENST00000509552 PTBP3O95758 552 aaKnown RBP15.02■□□□□ -0
CCHCR1-228ENST00000509552 MZT1Q08AG7 82 aa15.02■□□□□ -0
CCHCR1-228ENST00000509552 ZNF674Q2M3X9 581 aa15.02■□□□□ -0
CCHCR1-228ENST00000509552 BTNL3Q6UXE8 466 aa15.02■□□□□ -0
CCHCR1-228ENST00000509552 Q6ZR03 302 aa15.02■□□□□ -0
CCHCR1-228ENST00000509552 SLC16A13Q7RTY0 426 aa15.02■□□□□ -0
CCHCR1-228ENST00000509552 MSL2Q9HCI7 577 aa15.02■□□□□ -0
CCHCR1-228ENST00000509552 WASF3Q9UPY6 502 aa15.02■□□□□ -0
CCHCR1-228ENST00000509552 BDP1A6H8Y1 2624 aa15.02□□□□□ -0.01
CCHCR1-228ENST00000509552 CEBPZOSA8MTT3 80 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 C17orf98A8MV24 154 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 RAB29O14966 203 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 ATXN7O15265 892 aaPredicted RBP15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 EIF2S3P41091 472 aaKnown RBP15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 HOXA4Q00056 320 aaPredicted RBP15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 FAM53AQ6NSI3 398 aaPredicted RBP15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 ZNF66Q6ZN08 573 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 H2BFWTQ7Z2G1 175 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 CA5BP1Q8WTZ4 195 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 LHX4Q969G2 390 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 CIB3Q96Q77 187 aaPredicted RBP15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 TMEM147Q9BVK8 224 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 CLN8Q9UBY8 286 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 OR5H1A6NKK0 313 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 RBMXL2O75526 392 aaKnown RBP15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 WISP2O76076 250 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 SSTR5P35346 364 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 TRAT1Q6PIZ9 186 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 IGFL2Q6UWQ7 119 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 OR10P1Q8NGE3 313 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 DTD1Q8TEA8 209 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 PLSCR4Q9NRQ2 329 aa15.01□□□□□ -0.01
CCHCR1-228ENST00000509552 SPINT2O43291 252 aa15□□□□□ -0.01
CCHCR1-228ENST00000509552 ZNF737O75373 536 aa15□□□□□ -0.01
CCHCR1-228ENST00000509552 TFF1P04155 84 aa15□□□□□ -0.01
CCHCR1-228ENST00000509552 CXCL1P09341 107 aa15□□□□□ -0.01
CCHCR1-228ENST00000509552 ERVFRD-1P60508 538 aa15□□□□□ -0.01
CCHCR1-228ENST00000509552 PMS2P11Q13670 270 aa15□□□□□ -0.01
CCHCR1-228ENST00000509552 CENPVQ7Z7K6 275 aaPredicted RBP15□□□□□ -0.01
CCHCR1-228ENST00000509552 C1orf174Q8IYL3 243 aa15□□□□□ -0.01
CCHCR1-228ENST00000509552 TPRX1Q8N7U7 411 aa15□□□□□ -0.01
CCHCR1-228ENST00000509552 OR13A1Q8NGR1 328 aa15□□□□□ -0.01
CCHCR1-228ENST00000509552 HSD17B10Q99714 261 aaKnown RBP15□□□□□ -0.01
CCHCR1-228ENST00000509552 ZNF251Q9BRH9 671 aa15□□□□□ -0.01
CCHCR1-228ENST00000509552 FRYQ5TBA9 3013 aa15□□□□□ -0.01
CCHCR1-228ENST00000509552 MBP02144 154 aa15□□□□□ -0.01
CCHCR1-228ENST00000509552 FOXF2Q12947 444 aa15□□□□□ -0.01
CCHCR1-228ENST00000509552 SRSF6Q13247 344 aaKnown RBP15□□□□□ -0.01
CCHCR1-228ENST00000509552 MBNL2Q5VZF2 373 aaKnown RBP15□□□□□ -0.01
CCHCR1-228ENST00000509552 TMEM242Q9NWH2 141 aa15□□□□□ -0.01
CCHCR1-228ENST00000509552 METRNQ9UJH8 293 aa15□□□□□ -0.01
CCHCR1-228ENST00000509552 GTF3C1Q12789 2109 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 IGHV3-43A0A0B4J1X8 118 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 IGLV1-44P01699 117 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 IGHV3-43DP0DP04 118 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 RPP25LQ8N5L8 163 aaKnown RBP14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 RFESDQ8TAC1 157 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 PSG11Q9UQ72 335 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 TGIF2-C20orf24A0A0A6YYL0 155 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 IGHV2OR16-5A0A0B4J2B6 119 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 CYB5BO43169 146 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 ZG16O60844 167 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 CYB5R3P00387 301 aaPredicted RBP14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 CD55P08174 381 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 ADH4P08319 380 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 BRWD1-AS2P59051 145 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 Q3ZCU0 254 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 BEND4Q6ZU67 534 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 ZNF610Q8N9Z0 462 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 LRRC29Q8WV35 223 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 MRPL37Q9BZE1 423 aaKnown RBP14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 TMPRSS5Q9H3S3 457 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 SDF2L1Q9HCN8 221 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 PROCRQ9UNN8 238 aa14.99□□□□□ -0.01
CCHCR1-228ENST00000509552 CLDN34H7C241 214 aa14.98□□□□□ -0.01
CCHCR1-228ENST00000509552 FGF7P21781 194 aa14.98□□□□□ -0.01
CCHCR1-228ENST00000509552 CTAG1AP78358 180 aa14.98□□□□□ -0.01
CCHCR1-228ENST00000509552 HTD2P86397 168 aa14.98□□□□□ -0.01
CCHCR1-228ENST00000509552 NIT2Q9NQR4 276 aa14.98□□□□□ -0.01
CCHCR1-228ENST00000509552 IGHV1-18A0A0C4DH31 117 aa14.98□□□□□ -0.01
CCHCR1-228ENST00000509552 DEFB108AA8MXU0 73 aa14.98□□□□□ -0.01
CCHCR1-228ENST00000509552 AHRRA9YTQ3 701 aa14.98□□□□□ -0.01
CCHCR1-228ENST00000509552 ST8SIA5O15466 376 aa14.98□□□□□ -0.01
CCHCR1-228ENST00000509552 CLN5O75503 358 aa14.98□□□□□ -0.01
CCHCR1-228ENST00000509552 PRDX2P32119 198 aa14.98□□□□□ -0.01
CCHCR1-228ENST00000509552 B2MP61769 119 aa14.98□□□□□ -0.01
CCHCR1-228ENST00000509552 HNF4GQ14541 408 aa14.98□□□□□ -0.01
CCHCR1-228ENST00000509552 NCMAPQ5T1S8 102 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms