RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 CD40LGP29965 261 aa11.97□□□□□ -0.49
RNF4-213ENST00000509388 IER3P46695 156 aa11.97□□□□□ -0.49
RNF4-213ENST00000509388 RAB13P51153 203 aa11.97□□□□□ -0.49
RNF4-213ENST00000509388 LPCAT3Q6P1A2 487 aa11.97□□□□□ -0.49
RNF4-213ENST00000509388 DRAM1Q8N682 238 aa11.97□□□□□ -0.49
RNF4-213ENST00000509388 ZNF645Q8N7E2 425 aa11.97□□□□□ -0.49
RNF4-213ENST00000509388 OR4C16Q8NGL9 310 aa11.97□□□□□ -0.49
RNF4-213ENST00000509388 TRIM63Q969Q1 353 aa11.97□□□□□ -0.49
RNF4-213ENST00000509388 MOB3AQ96BX8 217 aa11.97□□□□□ -0.49
RNF4-213ENST00000509388 PRRT1Q99946 306 aa11.97□□□□□ -0.49
RNF4-213ENST00000509388 SDHAF2Q9NX18 166 aa11.97□□□□□ -0.49
RNF4-213ENST00000509388 SCP2D1Q9UJQ7 156 aa11.97□□□□□ -0.49
RNF4-213ENST00000509388 IGKV1D-13A0A0B4J2D9 117 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 LINC00854A0A1B0GVQ3 168 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 VGLL3A8MV65 326 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 TIMM23O14925 209 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 IGHV4-59P01825 116 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 IGKV1-13P0DP09 117 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 IL7P13232 177 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 DYNLT3P51808 116 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 KLF9Q13886 244 aaPredicted RBP11.96□□□□□ -0.49
RNF4-213ENST00000509388 HES1Q14469 280 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 ZNF660Q6AZW8 331 aaPredicted RBP11.96□□□□□ -0.49
RNF4-213ENST00000509388 FAAP20Q6NZ36 180 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 TMEM86BQ8N661 226 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 ZBTB34Q8NCN2 500 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 OR4D10Q8NGI6 311 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 OR56B4Q8NH76 319 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 DEDD2Q8WXF8 326 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 AKR1E2Q96JD6 320 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 MRPL20Q9BYC9 149 aaKnown RBP11.96□□□□□ -0.49
RNF4-213ENST00000509388 CCL28Q9NRJ3 127 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 PITPNC1Q9UKF7 332 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 POMT1Q9Y6A1 747 aa11.96□□□□□ -0.49
RNF4-213ENST00000509388 MTORP42345 2549 aa11.96□□□□□ -0.5
RNF4-213ENST00000509388 FN1P02751 2386 aaKnown RBP11.95□□□□□ -0.5
RNF4-213ENST00000509388 A0A1W2PPI3 338 aa11.95□□□□□ -0.5
RNF4-213ENST00000509388 PGAM2P15259 253 aa11.95□□□□□ -0.5
RNF4-213ENST00000509388 S100GP29377 79 aa11.95□□□□□ -0.5
RNF4-213ENST00000509388 HILS1P60008 231 aa11.95□□□□□ -0.5
RNF4-213ENST00000509388 LSAMPQ13449 338 aa11.95□□□□□ -0.5
RNF4-213ENST00000509388 LY6EQ16553 131 aa11.95□□□□□ -0.5
RNF4-213ENST00000509388 CMTM1Q8IZ96 169 aa11.95□□□□□ -0.5
RNF4-213ENST00000509388 DRAXINQ8NBI3 349 aaPredicted RBP11.95□□□□□ -0.5
RNF4-213ENST00000509388 TERB2Q8NHR7 220 aa11.95□□□□□ -0.5
RNF4-213ENST00000509388 ADTRPQ96IZ2 230 aa11.95□□□□□ -0.5
RNF4-213ENST00000509388 DUX5Q96PT3 197 aa11.95□□□□□ -0.5
RNF4-213ENST00000509388 SDHCQ99643 169 aaPredicted RBP11.95□□□□□ -0.5
RNF4-213ENST00000509388 ZNF251Q9BRH9 671 aa11.95□□□□□ -0.5
RNF4-213ENST00000509388 HRASLSQ9HDD0 168 aa11.95□□□□□ -0.5
RNF4-213ENST00000509388 IGHV3-72A0A0B4J1Y9 119 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 OR5H14A6NHG9 310 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 H7C2Y5 167 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 APOA2P02652 100 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 CT45A6P0DMU7 189 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 CT45A5P0DMU8 189 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 CT45A7P0DMV0 189 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 CD24P25063 80 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 CD1BP29016 333 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 MC5RP33032 325 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 ECI1P42126 302 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 THBS3P49746 956 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 SLC9A3R2Q15599 337 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 MSMO1Q15800 293 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 GLDNQ6ZMI3 551 aaPredicted RBP11.94□□□□□ -0.5
RNF4-213ENST00000509388 IDO2Q6ZQW0 420 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 SLC38A6Q8IZM9 456 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 OR51S1Q8NGJ8 323 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 TSC22D3Q99576 134 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 NABP2Q9BQ15 211 aa11.94□□□□□ -0.5
RNF4-213ENST00000509388 TEP1Q99973 2627 aaKnown RBP11.94□□□□□ -0.5
RNF4-213ENST00000509388 NAP1L6A6NFF2 107 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 DNAJC9-AS1A6NH13 148 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 TRIM77I1YAP6 450 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 GPR31O00270 319 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 IGKV1D-33P01593 117 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 IGKV1-33P01594 117 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 SNRNP70P08621 437 aaKnown RBP11.93□□□□□ -0.5
RNF4-213ENST00000509388 ZNF735P0CB33 412 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 UCP3P55916 312 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 CBX3Q13185 183 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 TUSC1Q2TAM9 212 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 ABCA11PQ4W5N1 156 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 THNSL2Q86YJ6 484 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 OR2T10Q8NGZ9 312 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 ZFAND1Q8TCF1 268 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 SCGB3A2Q96PL1 93 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 HSD17B10Q99714 261 aaKnown RBP11.93□□□□□ -0.5
RNF4-213ENST00000509388 C7orf50Q9BRJ6 194 aaKnown RBP11.93□□□□□ -0.5
RNF4-213ENST00000509388 FXYD6Q9H0Q3 95 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 VPREB3Q9UKI3 123 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 TCF19Q9Y242 345 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 SVEP1Q4LDE5 3571 aa11.93□□□□□ -0.5
RNF4-213ENST00000509388 NSD1Q96L73 2696 aaPredicted RBP11.92□□□□□ -0.5
RNF4-213ENST00000509388 CLDN34H7C241 214 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 TNFSF12O43508 249 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 PROP1O75360 226 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 TMEM11P17152 192 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 GNRHRP30968 328 aa11.92□□□□□ -0.5
RNF4-213ENST00000509388 DUTP33316 252 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms