RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 RCC2Q9P258 522 aaKnown RBP7.14□□□□□ -1.27
NEDD9-211ENST00000508546 TRAPPC2LQ9UL33 140 aa7.14□□□□□ -1.27
NEDD9-211ENST00000508546 DYNC1H1Q14204 4646 aaKnown RBP7.13□□□□□ -1.27
NEDD9-211ENST00000508546 ZNF780AO75290 641 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-211ENST00000508546 CA11O75493 328 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 SERPINA2P20848 420 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 TIMM50Q3ZCQ8 353 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 FAM71F2Q6NXP2 309 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 UNQ5815/PRO19632Q6UWF5 114 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 TMPRSS11AQ6ZMR5 421 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 ZNF554Q86TJ5 538 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 LHFPL3Q86UP9 236 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 PPP1R27Q86WC6 154 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 SYS1Q8N2H4 156 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 PRR18Q8N4B5 295 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 OR4K15Q8NH41 348 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 OR5AK2Q8NH90 309 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 TSEN15Q8WW01 171 aaKnown RBP7.13□□□□□ -1.27
NEDD9-211ENST00000508546 MS4A10Q96PG2 267 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 PDCD1LG2Q9BQ51 273 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 ALG8Q9BVK2 526 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 FBXL15Q9H469 300 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 NDUFB11Q9NX14 153 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 JPT1Q9UK76 154 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 ING4Q9UNL4 249 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 A3GALT2U3KPV4 340 aa7.13□□□□□ -1.27
NEDD9-211ENST00000508546 MCRIP1C9JLW8 97 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 H3BUA1 57 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 FCN1O00602 326 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 SLC22A1O15245 554 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 AIREO43918 545 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 YPEL1O60688 119 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 SC5DO75845 299 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 TRGV3P03979 118 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 GTF2F2P13984 249 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 RCC1P18754 421 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-211ENST00000508546 GADD45AP24522 165 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 ZNF93P35789 620 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-211ENST00000508546 MECP2P51608 486 aaKnown RBP7.12□□□□□ -1.27
NEDD9-211ENST00000508546 HTD2P86397 168 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 MRPL28Q13084 256 aaKnown RBP7.12□□□□□ -1.27
NEDD9-211ENST00000508546 GNMTQ14749 295 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 SSX1Q16384 188 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 CTF1Q16619 201 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 ZNF562Q6V9R5 426 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 LAX1Q8IWV1 398 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 ZNF485Q8NCK3 441 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 LFNGQ8NES3 379 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 OR2K2Q8NGT1 345 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 ABHD5Q8WTS1 349 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 UFD1Q92890 307 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 YPEL2Q96QA6 119 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 TSC22D3Q99576 134 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 S100A13Q99584 98 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 DCUN1D5Q9BTE7 237 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 TAF9BQ9HBM6 251 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 TMEM138Q9NPI0 162 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 MBNL3Q9NUK0 354 aaKnown RBP7.12□□□□□ -1.27
NEDD9-211ENST00000508546 ETAA1Q9NY74 926 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 TAS2R4Q9NYW5 299 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 GAB2Q9UQC2 676 aa7.12□□□□□ -1.27
NEDD9-211ENST00000508546 SAA2-SAA4A0A096LPE2 208 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 A0A0G2JLM5 398 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 C13orf42A0A1B0GVH6 325 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 A0A1W2PP11 408 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 IZUMO1RA6ND01 250 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 OR5H14A6NHG9 310 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 RBBP9O75884 186 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 TPPPO94811 219 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 BRI3O95415 125 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 CD2P06729 351 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 CSN3P07498 182 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 SAA2P0DJI9 122 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-211ENST00000508546 CPEP16870 476 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 PPP1CCP36873 323 aaKnown RBP7.11□□□□□ -1.27
NEDD9-211ENST00000508546 OR3A3P47888 321 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 SYNJ2BPP57105 145 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 TAS2R43P59537 309 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 GPR176Q14439 515 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 SPCS2Q15005 226 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 PLGLAQ15195 96 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 SLC22A6Q4U2R8 563 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 DDI2Q5TDH0 399 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 LIPKQ5VXJ0 399 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 FAM131AQ6UXB0 335 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 MRPS24Q96EL2 167 aaKnown RBP7.11□□□□□ -1.27
NEDD9-211ENST00000508546 RNF5Q99942 180 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 FAM103A1Q9BTL3 118 aaKnown RBP7.11□□□□□ -1.27
NEDD9-211ENST00000508546 ST6GALNAC5Q9BVH7 336 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 ISG20L2Q9H9L3 353 aaKnown RBP7.11□□□□□ -1.27
NEDD9-211ENST00000508546 PLEKHA3Q9HB20 300 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 UBR4Q5T4S7 5183 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 VPS13DQ5THJ4 4388 aa7.11□□□□□ -1.27
NEDD9-211ENST00000508546 DNAH11Q96DT5 4516 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 LOC100506127A0A0U1RQW1 187 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 PNMA8CA0A1B0GUJ8 204 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 ANKRD34BA5PLL1 514 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 NUPR2A6NF83 97 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 FAM90A7PA6NKC0 464 aa7.1□□□□□ -1.27
NEDD9-211ENST00000508546 FAM90A23PA8MXZ1 464 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms