RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 OR1L3Q8NH93 324 aa9.18□□□□□ -0.94
PDLIM5-210ENST00000508216 RTN4IP1Q8WWV3 396 aaPredicted RBP9.18□□□□□ -0.94
PDLIM5-210ENST00000508216 RPRMQ9NS64 109 aa9.18□□□□□ -0.94
PDLIM5-210ENST00000508216 INSL5Q9Y5Q6 135 aa9.18□□□□□ -0.94
PDLIM5-210ENST00000508216 SCN5AQ14524 2016 aa9.18□□□□□ -0.94
PDLIM5-210ENST00000508216 SCN2AQ99250 2005 aa9.18□□□□□ -0.94
PDLIM5-210ENST00000508216 PLXNA4Q9HCM2 1894 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 NPIPB5A8MRT5 1133 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 H3BUT2 72 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 ISLRO14498 428 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 SOCS1O15524 211 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 GATA2P23769 480 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 IHHQ14623 411 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 ARTNQ5T4W7 220 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 DCAF12Q5T6F0 453 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 EEF1DP3Q658K8 133 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 Q6AWC8 147 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 SHISA6Q6ZSJ9 500 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 LSRQ86X29 649 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 TMEM25Q86YD3 366 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 RFLNBQ8N5W9 214 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 ZNF439Q8NDP4 499 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 OR5AN1Q8NGI8 311 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 OR5D14Q8NGL3 314 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 ZNF721Q8TF20 911 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 MAP1LC3CQ9BXW4 147 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 GNB4Q9HAV0 340 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 HES4Q9HCC6 221 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 SH2D2AQ9NP31 389 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 PRSS16Q9NQE7 514 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 B4GALT7Q9UBV7 327 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 NCKAP5O14513 1909 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 ADAMTSL1Q8N6G6 1762 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 PLXNB2O15031 1838 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 HMGB3O15347 200 aaKnown RBP9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 LDB3O75112 727 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 ZNF737O75373 536 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 FCN3O75636 299 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 HPNP05981 417 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 CT45A6P0DMU7 189 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 CT45A5P0DMU8 189 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 CT45A7P0DMV0 189 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 HTR1DP28221 377 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 LTBRP36941 435 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 FUT6P51993 359 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 UBE2G1P62253 170 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 SLC35B1P78383 322 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 DUSP2Q05923 314 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 ADIGQ0VDE8 80 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 TIGITQ495A1 244 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 CT45A1Q5HYN5 189 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 SAMD5Q5TGI4 173 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 ABHD17CQ6PCB6 329 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 SLC25A47Q6Q0C1 308 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 PIANPQ8IYJ0 282 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 OR2M3Q8NG83 312 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 OR52E2Q8NGJ4 325 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 OR10G6Q8NH81 332 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 OR1L1Q8NH94 360 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 CT45A3Q8NHU0 189 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 CT55Q8WUE5 264 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 DGAT2Q96PD7 388 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 ZNF665Q9H7R5 613 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 OR1A1Q9P1Q5 309 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 CKLFQ9UBR5 152 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 RABAC1Q9UI14 185 aa9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 RCL1Q9Y2P8 373 aaKnown RBP9.17□□□□□ -0.94
PDLIM5-210ENST00000508216 F5H5K5 113 aa9.16□□□□□ -0.94
PDLIM5-210ENST00000508216 M0R2Z0 102 aa9.16□□□□□ -0.94
PDLIM5-210ENST00000508216 RHODO00212 210 aa9.16□□□□□ -0.94
PDLIM5-210ENST00000508216 FCN1O00602 326 aa9.16□□□□□ -0.94
PDLIM5-210ENST00000508216 PRTN3P24158 256 aa9.16□□□□□ -0.94
PDLIM5-210ENST00000508216 CXCL12P48061 93 aa9.16□□□□□ -0.94
PDLIM5-210ENST00000508216 RPS28P62857 69 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-210ENST00000508216 MGAT2Q10469 447 aa9.16□□□□□ -0.94
PDLIM5-210ENST00000508216 FOXE3Q13461 319 aa9.16□□□□□ -0.94
PDLIM5-210ENST00000508216 MS4A13Q5J8X5 152 aa9.16□□□□□ -0.94
PDLIM5-210ENST00000508216 SYT8Q8NBV8 401 aa9.16□□□□□ -0.94
PDLIM5-210ENST00000508216 KIR2DL5BQ8NHK3 375 aa9.16□□□□□ -0.94
PDLIM5-210ENST00000508216 BAHD1Q8TBE0 780 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-210ENST00000508216 SUSD3Q96L08 255 aa9.16□□□□□ -0.94
PDLIM5-210ENST00000508216 ASCL2Q99929 193 aa9.16□□□□□ -0.94
PDLIM5-210ENST00000508216 NLRC5Q86WI3 1866 aa9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 NUP210Q8TEM1 1887 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 TRAV36DV7A0A075B6V5 113 aa9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 A0A1W2PP11 408 aa9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 CEBPZOSA8MTT3 80 aa9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 SOX1O00570 391 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 CA1P00915 261 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 SP9P0CG40 484 aa9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 PRSS56P0CW18 603 aa9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 KIR2DL1P43626 348 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 UQCRFS1P47985 274 aa9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 TAF10Q12962 218 aa9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 ZNF74Q16587 644 aa9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 EMC4Q5J8M3 183 aa9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 LCE2AQ5TA79 106 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 Q6ZS49 121 aa9.15□□□□□ -0.94
PDLIM5-210ENST00000508216 HAPLN4Q86UW8 402 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms