RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 ELOBQ15370 118 aa9.15□□□□□ -0.95
LIN54-207ENST00000508171 SLC35E4Q6ICL7 350 aa9.15□□□□□ -0.95
LIN54-207ENST00000508171 BEND4Q6ZU67 534 aa9.15□□□□□ -0.95
LIN54-207ENST00000508171 OR13A1Q8NGR1 328 aa9.15□□□□□ -0.95
LIN54-207ENST00000508171 Q8WTZ3 238 aa9.15□□□□□ -0.95
LIN54-207ENST00000508171 RNF212BA8MTL3 300 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 IGKV1D-33P01593 117 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 IGKV1-33P01594 117 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 TLE1Q04724 770 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 SLC38A11Q08AI6 406 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 FAM90A2PQ658T7 463 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 ZNF610Q8N9Z0 462 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 DEFB124Q8NES8 71 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 NANPQ8TBE9 248 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 PLPPR2Q96GM1 343 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 PSMG3Q9BT73 122 aaPredicted RBP9.14□□□□□ -0.95
LIN54-207ENST00000508171 CXXC4Q9H2H0 198 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 METTL1Q9UBP6 276 aaKnown RBP9.14□□□□□ -0.95
LIN54-207ENST00000508171 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.14□□□□□ -0.95
LIN54-207ENST00000508171 ODAMA1E959 279 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 LINC00473A8K010 186 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 HMGB3O15347 200 aaKnown RBP9.14□□□□□ -0.95
LIN54-207ENST00000508171 COX5AP20674 150 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 SPINK9Q5DT21 86 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 ALKBH2Q6NS38 261 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 TMEM14EPQ6UXP3 125 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 TCTEX1D2Q8WW35 142 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 MBD3L1Q8WWY6 194 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 TAF15Q92804 592 aaKnown RBP eCLIP9.14□□□□□ -0.95
LIN54-207ENST00000508171 ZDHHC16Q969W1 377 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 HSPB7Q9UBY9 170 aa9.14□□□□□ -0.95
LIN54-207ENST00000508171 RP1L1Q8IWN7 2480 aaPredicted RBP9.13□□□□□ -0.95
LIN54-207ENST00000508171 TGIF2-C20orf24A0A0A6YYL0 155 aa9.13□□□□□ -0.95
LIN54-207ENST00000508171 LRRC30A6NM36 301 aa9.13□□□□□ -0.95
LIN54-207ENST00000508171 ZG16O60844 167 aa9.13□□□□□ -0.95
LIN54-207ENST00000508171 P0C879 139 aa9.13□□□□□ -0.95
LIN54-207ENST00000508171 BCL2P10415 239 aa9.13□□□□□ -0.95
LIN54-207ENST00000508171 SERF2P84101 59 aa9.13□□□□□ -0.95
LIN54-207ENST00000508171 LTC4SQ16873 150 aa9.13□□□□□ -0.95
LIN54-207ENST00000508171 NCMAPQ5T1S8 102 aa9.13□□□□□ -0.95
LIN54-207ENST00000508171 RPP25LQ8N5L8 163 aaKnown RBP9.13□□□□□ -0.95
LIN54-207ENST00000508171 NINJ1Q92982 152 aa9.13□□□□□ -0.95
LIN54-207ENST00000508171 OPN3Q9H1Y3 402 aaPredicted RBP9.13□□□□□ -0.95
LIN54-207ENST00000508171 A0A087WWC5 75 aa9.13□□□□□ -0.95
LIN54-207ENST00000508171 SLC35E3Q7Z769 313 aa9.13□□□□□ -0.95
LIN54-207ENST00000508171 CD177Q8N6Q3 437 aa9.13□□□□□ -0.95
LIN54-207ENST00000508171 CA5BP1Q8WTZ4 195 aa9.13□□□□□ -0.95
LIN54-207ENST00000508171 CISD1Q9NZ45 108 aaKnown RBP9.13□□□□□ -0.95
LIN54-207ENST00000508171 FAM90A26D6RGX4 464 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 AP4M1O00189 453 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 AQP7O14520 342 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 ST8SIA5O15466 376 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 IFNA17P01571 189 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 EDDM3AQ14507 147 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 TMEM41BQ5BJD5 291 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 ZBTB34Q8NCN2 500 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 TMPRSS5Q9H3S3 457 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 ASCL3Q9NQ33 180 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 PLSCR4Q9NRQ2 329 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.12□□□□□ -0.95
LIN54-207ENST00000508171 DKK4Q9UBT3 224 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 PSG11Q9UQ72 335 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 IGHV2OR16-5A0A0B4J2B6 119 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 IGHV1-18A0A0C4DH31 117 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 MAP1LC3B2A6NCE7 125 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 CEBPZOSA8MTT3 80 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 FTH1P19P0C7X4 201 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 HOXB1P14653 301 aaPredicted RBP9.12□□□□□ -0.95
LIN54-207ENST00000508171 KITLGP21583 273 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 MSMO1Q15800 293 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 MSMPQ1L6U9 139 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 ACSM6Q6P461 480 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 LRP11Q86VZ4 500 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 C1QL4Q86Z23 238 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 PRR7Q8TB68 274 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 TAAR6Q96RI8 345 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 AGMATQ9BSE5 352 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 MAP1LC3BQ9GZQ8 125 aa9.12□□□□□ -0.95
LIN54-207ENST00000508171 SEBOXQ9HB31 216 aaPredicted RBP9.12□□□□□ -0.95
LIN54-207ENST00000508171 ATMQ13315 3056 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 PMS2P5A8MQ11 134 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 PRR33A8MZF0 331 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 PROP1O75360 226 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 RBMXL2O75526 392 aaKnown RBP9.11□□□□□ -0.95
LIN54-207ENST00000508171 TNFSF13O75888 250 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 YIF1AO95070 293 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 IGHV3-13P01766 116 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 IGHV3-7P01780 117 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 GCH1P30793 250 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 ZNF718Q3SXZ3 478 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 Q3ZCU0 254 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 SPRNQ5BIV9 151 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 IGFL2Q6UWQ7 119 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 PIP4P1Q86T03 277 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 OR2Z1Q8NG97 314 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 OR10G4Q8NGN3 311 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 LRRC29Q8WV35 223 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 ZNF71Q9NQZ8 489 aaPredicted RBP9.11□□□□□ -0.95
LIN54-207ENST00000508171 SLC39A9Q9NUM3 307 aa9.11□□□□□ -0.95
LIN54-207ENST00000508171 MAP1BP46821 2468 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms