RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CUL9Q8IWT3 2517 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 GALMQ96C23 342 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 RAB39BQ96DA2 213 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 MUCL1Q96DR8 90 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 MMP24Q9Y5R2 645 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 SLC25A15Q9Y619 301 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.13□□□□□ -0.47
DDX41-208ENST00000507955 TMEM30CPA0ZSE6 113 aa12.13□□□□□ -0.47
DDX41-208ENST00000507955 PPIHO43447 177 aaKnown RBP12.13□□□□□ -0.47
DDX41-208ENST00000507955 FABP1P07148 127 aa12.13□□□□□ -0.47
DDX41-208ENST00000507955 MAS1LP35410 378 aa12.13□□□□□ -0.47
DDX41-208ENST00000507955 G6PCP35575 357 aa12.13□□□□□ -0.47
DDX41-208ENST00000507955 CYB561D1Q8N8Q1 229 aa12.13□□□□□ -0.47
DDX41-208ENST00000507955 SLC25A31Q9H0C2 315 aa12.13□□□□□ -0.47
DDX41-208ENST00000507955 KCNIP1Q9NZI2 227 aa12.13□□□□□ -0.47
DDX41-208ENST00000507955 C1QTNF9BB2RNN3 333 aa12.13□□□□□ -0.47
DDX41-208ENST00000507955 NPIPB11E5RHQ5 1161 aa12.13□□□□□ -0.47
DDX41-208ENST00000507955 BRWD1-AS2P59051 145 aa12.13□□□□□ -0.47
DDX41-208ENST00000507955 UTF1Q5T230 341 aa12.13□□□□□ -0.47
DDX41-208ENST00000507955 MOB1BQ7L9L4 216 aa12.13□□□□□ -0.47
DDX41-208ENST00000507955 FGFRL1Q8N441 504 aa12.13□□□□□ -0.47
DDX41-208ENST00000507955 RBMXL3Q8N7X1 1067 aaKnown RBP12.13□□□□□ -0.47
DDX41-208ENST00000507955 ZNF251Q9BRH9 671 aa12.13□□□□□ -0.47
DDX41-208ENST00000507955 FAM27E3Q08E93 113 aa12.12□□□□□ -0.47
DDX41-208ENST00000507955 SPINK9Q5DT21 86 aa12.12□□□□□ -0.47
DDX41-208ENST00000507955 C1orf162Q8NEQ5 155 aaPredicted RBP12.12□□□□□ -0.47
DDX41-208ENST00000507955 RSG1Q9BU20 258 aa12.12□□□□□ -0.47
DDX41-208ENST00000507955 KIAA1456Q9P272 454 aa12.12□□□□□ -0.47
DDX41-208ENST00000507955 A0A1B0GU03 582 aa12.12□□□□□ -0.47
DDX41-208ENST00000507955 DUXBA0A1W2PPF3 345 aa12.12□□□□□ -0.47
DDX41-208ENST00000507955 MBD3L4A6NDZ8 208 aaPredicted RBP12.12□□□□□ -0.47
DDX41-208ENST00000507955 MBD3L3A6NE82 208 aaPredicted RBP12.12□□□□□ -0.47
DDX41-208ENST00000507955 MBD3L5A6NJ08 208 aaPredicted RBP12.12□□□□□ -0.47
DDX41-208ENST00000507955 C17orf98A8MV24 154 aa12.12□□□□□ -0.47
DDX41-208ENST00000507955 AP4M1O00189 453 aa12.12□□□□□ -0.47
DDX41-208ENST00000507955 ST8SIA5O15466 376 aa12.12□□□□□ -0.47
DDX41-208ENST00000507955 KITLGP21583 273 aa12.12□□□□□ -0.47
DDX41-208ENST00000507955 THNSL2Q86YJ6 484 aa12.12□□□□□ -0.47
DDX41-208ENST00000507955 ZNRF1Q8ND25 227 aa12.12□□□□□ -0.47
DDX41-208ENST00000507955 MBD3L2Q8NHZ7 208 aaPredicted RBP12.12□□□□□ -0.47
DDX41-208ENST00000507955 IL22RA2Q969J5 263 aa12.12□□□□□ -0.47
DDX41-208ENST00000507955 SH3BGRL2Q9UJC5 107 aa12.12□□□□□ -0.47
DDX41-208ENST00000507955 PKDREJQ9NTG1 2253 aa12.12□□□□□ -0.47
DDX41-208ENST00000507955 SPRY3O43610 288 aa12.11□□□□□ -0.47
DDX41-208ENST00000507955 SYNGR2O43760 224 aa12.11□□□□□ -0.47
DDX41-208ENST00000507955 SCAF4O95104 1147 aaKnown RBP12.11□□□□□ -0.47
DDX41-208ENST00000507955 CXCL1P09341 107 aa12.11□□□□□ -0.47
DDX41-208ENST00000507955 SELLP14151 372 aa12.11□□□□□ -0.47
DDX41-208ENST00000507955 SPANXN5Q5MJ07 72 aa12.11□□□□□ -0.47
DDX41-208ENST00000507955 FIP1L1Q6UN15 594 aaKnown RBP12.11□□□□□ -0.47
DDX41-208ENST00000507955 HAPLN4Q86UW8 402 aa12.11□□□□□ -0.47
DDX41-208ENST00000507955 VSIRQ9H7M9 311 aa12.11□□□□□ -0.47
DDX41-208ENST00000507955 TACC2O95359 2948 aa12.11□□□□□ -0.47
DDX41-208ENST00000507955 IFITM10A6NMD0 228 aa12.11□□□□□ -0.47
DDX41-208ENST00000507955 S100A9P06702 114 aaKnown RBP12.11□□□□□ -0.47
DDX41-208ENST00000507955 BMP5P22003 454 aa12.11□□□□□ -0.47
DDX41-208ENST00000507955 FAM180AQ6UWF9 173 aa12.11□□□□□ -0.47
DDX41-208ENST00000507955 CLDND2Q8NHS1 167 aa12.11□□□□□ -0.47
DDX41-208ENST00000507955 TLN1Q9Y490 2541 aaKnown RBP12.11□□□□□ -0.47
DDX41-208ENST00000507955 LRBAP50851 2863 aa12.11□□□□□ -0.47
DDX41-208ENST00000507955 IGKV1D-17A0A075B6S4 117 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 YIF1AO95070 293 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 S1PR2O95136 353 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 ERVFRD-1P60508 538 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 DLK1P80370 383 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 P2RY6Q15077 328 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 BEND4Q6ZU67 534 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 Q8WTZ3 238 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 EDARADDQ8WWZ3 215 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 OR2V2Q96R30 315 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 SMDT1Q9H4I9 107 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 PSENENQ9NZ42 101 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 MIOXQ9UGB7 285 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 PSG11Q9UQ72 335 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 URGCP-MRPS24S4R325 110 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 OOEPA6NGQ2 149 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 LINC00473A8K010 186 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 CD55P08174 381 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 CEACAM1P13688 526 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 PRDX2P32119 198 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 TAGLN2P37802 199 aaKnown RBP12.1□□□□□ -0.47
DDX41-208ENST00000507955 RPS10P46783 165 aaKnown RBP12.1□□□□□ -0.47
DDX41-208ENST00000507955 SLC35E4Q6ICL7 350 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 SLC25A24Q6NUK1 477 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 DUX4L9Q6RFH8 374 aaPredicted RBP12.1□□□□□ -0.47
DDX41-208ENST00000507955 Q6ZS92 163 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 ZNF429Q86V71 674 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 MOGAT3Q86VF5 341 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 C1QL4Q86Z23 238 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 TGIF2LYQ8IUE0 185 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 ZNF645Q8N7E2 425 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 ATP5SQ99766 215 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 FAM234AQ9H0X4 552 aa12.1□□□□□ -0.47
DDX41-208ENST00000507955 LIN7CQ9NUP9 197 aaKnown RBP12.1□□□□□ -0.47
DDX41-208ENST00000507955 BAXQ07812 192 aa12.09□□□□□ -0.47
DDX41-208ENST00000507955 ELOBQ15370 118 aa12.09□□□□□ -0.47
DDX41-208ENST00000507955 ZNF506Q5JVG8 444 aa12.09□□□□□ -0.47
DDX41-208ENST00000507955 MBNL2Q5VZF2 373 aaKnown RBP12.09□□□□□ -0.47
DDX41-208ENST00000507955 STX12Q86Y82 276 aa12.09□□□□□ -0.47
DDX41-208ENST00000507955 WSB1Q9Y6I7 421 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms