RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 ZMYND19Q96E35 227 aaPredicted RBP6.64□□□□□ -1.35
SCN1A-207ENST00000507401 GALNT14Q96FL9 552 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 PGAM5Q96HS1 289 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 CLCC1Q96S66 551 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 AMELYQ99218 206 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 NDUFAF3Q9BU61 184 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 SLC35B3Q9H1N7 401 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 WDR13Q9H1Z4 485 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 PRDM13Q9H4Q3 707 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 PLEKHA2Q9HB19 425 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 ESM1Q9NQ30 184 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 ZNF319Q9P2F9 582 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 GNG8Q9UK08 70 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 MPC1Q9Y5U8 109 aa6.64□□□□□ -1.35
SCN1A-207ENST00000507401 P2RY10O00398 339 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 ENSAO43768 121 aaKnown RBP6.63□□□□□ -1.35
SCN1A-207ENST00000507401 GCGP01275 180 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 CD3DP04234 171 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 AMY2AP04746 511 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 OR5AC1P0C628 307 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 GNALP38405 381 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 ATP1B3P54709 279 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 NUTF2P61970 127 aaKnown RBP6.63□□□□□ -1.35
SCN1A-207ENST00000507401 ROM1Q03395 351 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 FOXL1Q12952 345 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 TMEM128Q5BJH2 165 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 ZNF684Q5T5D7 378 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 LRRTM1Q86UE6 522 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 BCL6BQ8N143 479 aaPredicted RBP6.63□□□□□ -1.35
SCN1A-207ENST00000507401 ARRDC1Q8N5I2 433 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 SIGLECL1Q8N7X8 197 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 C3orf56Q8N813 242 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 NKAIN3Q8N8D7 197 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 UBAC2Q8NBM4 344 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 OR10R2Q8NGX6 335 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 TMED6Q8WW62 240 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 C22orf15Q8WYQ4 148 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 SLC25A28Q96A46 364 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 TBX5Q99593 518 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 HIPK2Q9H2X6 1198 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 NCOR1P1Q9H4R4 102 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 TAF9BQ9HBM6 251 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 CYTL1Q9NRR1 136 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 TMEM242Q9NWH2 141 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 LAMP5Q9UJQ1 280 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 V9GYS6 101 aa6.63□□□□□ -1.35
SCN1A-207ENST00000507401 TRAV18A0A075B6X5 111 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 BORCS7-ASMTA0A0B4J1R7 106 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 A0A0U1RQV5 110 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 SMCO3A2RU48 225 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 A6NLC8 198 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 TMEM210A6NLX4 147 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 RAB27BO00194 218 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 CDIPTO14735 213 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 PIN1P1O15428 100 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 ADAM20O43506 726 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 MED6O75586 246 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 ADAP1O75689 374 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 OR2C1O95371 312 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 CSTBP04080 98 aaKnown RBP6.62□□□□□ -1.35
SCN1A-207ENST00000507401 RNASE1P07998 156 aaKnown RBP6.62□□□□□ -1.35
SCN1A-207ENST00000507401 IGHV4-38-2P0DP08 117 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 PGAM2P15259 253 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 SULT1A1P50225 295 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 CLINT1Q14677 625 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 ARL6IP1Q15041 203 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 SURF2Q15527 256 aaPredicted RBP6.62□□□□□ -1.35
SCN1A-207ENST00000507401 TP53I3Q53FA7 332 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 AWAT1Q58HT5 328 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 PYY3Q5JQD4 70 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 C9orf152Q5JTZ5 239 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 KRBOX4Q5JUW0 171 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 WDR82Q6UXN9 313 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 ZNF826PQ6ZT77 177 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 FAM90A1Q86YD7 464 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 ZNF679Q8IYX0 411 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 BOLLQ8N9W6 283 aaKnown RBP6.62□□□□□ -1.35
SCN1A-207ENST00000507401 ZNF383Q8NA42 475 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 OR10G4Q8NGN3 311 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 OR14K1Q8NGZ2 314 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 OR5P3Q8WZ94 311 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 FAM3DQ96BQ1 224 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 SEH1LQ96EE3 360 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 BTF3L4Q96K17 158 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 ZNF48Q96MX3 618 aaPredicted RBP6.62□□□□□ -1.35
SCN1A-207ENST00000507401 HIST1H2AAQ96QV6 131 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 GFI1Q99684 422 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 RTL8AQ9BWD3 113 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 ACTR3CQ9C0K3 210 aaPredicted RBP6.62□□□□□ -1.35
SCN1A-207ENST00000507401 CTSZQ9UBR2 303 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 FBLN5Q9UBX5 448 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 PITPNC1Q9UKF7 332 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 GTF2A1LQ9UNN4 478 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 RHBDD3Q9Y3P4 386 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 LRP12Q9Y561 859 aa6.62□□□□□ -1.35
SCN1A-207ENST00000507401 PIGBOS1A0A0B4J2F0 54 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 TMEM269A0A1B0GVZ9 245 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 C5orf51A6NDU8 294 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 SRRM5B3KS81 715 aa6.61□□□□□ -1.35
SCN1A-207ENST00000507401 C22orf46C9J442 243 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms