RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 FLVCR2Q9UPI3 526 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 GAB2Q9UQC2 676 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 TBL2Q9Y4P3 447 aaKnown RBP11.48□□□□□ -0.57
RNF4-208ENST00000507247 MINOS1-NBL1R4GNA1 71 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 ZANQ9Y493 2812 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 LEUTXA8MZ59 168 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 GPR31O00270 319 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 TNFSF12O43508 249 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 TCRBP04435 133 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 CTSDP07339 412 aaPredicted RBP11.47□□□□□ -0.57
RNF4-208ENST00000507247 EPHA1P21709 976 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 IL3RAP26951 378 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 ECI1P42126 302 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 LINC00205P59089 165 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 MSMO1Q15800 293 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 PHLDA2Q53GA4 152 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 TPTE2P1Q5T6R2 138 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 Q71RC1 249 aaPredicted RBP11.47□□□□□ -0.57
RNF4-208ENST00000507247 ZDHHC22Q8N966 263 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 ENKURQ8TC29 256 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 SLC25A21Q9BQT8 299 aaPredicted RBP11.47□□□□□ -0.57
RNF4-208ENST00000507247 RTBDNQ9BSG5 229 aaPredicted RBP11.47□□□□□ -0.57
RNF4-208ENST00000507247 GHITMQ9H3K2 345 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 TMEM160Q9NX00 188 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 NUP50Q9UKX7 468 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 HILPDAQ9Y5L2 63 aa11.47□□□□□ -0.57
RNF4-208ENST00000507247 SETD2Q9BYW2 2564 aaPredicted RBP11.47□□□□□ -0.57
RNF4-208ENST00000507247 A0A0U1RQK1 487 aa11.46□□□□□ -0.57
RNF4-208ENST00000507247 M0R1X1 148 aa11.46□□□□□ -0.57
RNF4-208ENST00000507247 ARPC1BO15143 372 aaKnown RBP11.46□□□□□ -0.57
RNF4-208ENST00000507247 SLC22A5O76082 557 aa11.46□□□□□ -0.57
RNF4-208ENST00000507247 RPL30P62888 115 aaKnown RBP11.46□□□□□ -0.57
RNF4-208ENST00000507247 ZNF816Q0VGE8 651 aaPredicted RBP11.46□□□□□ -0.57
RNF4-208ENST00000507247 FAM71F2Q6NXP2 309 aa11.46□□□□□ -0.57
RNF4-208ENST00000507247 LPCAT3Q6P1A2 487 aa11.46□□□□□ -0.57
RNF4-208ENST00000507247 BCL6BQ8N143 479 aaPredicted RBP11.46□□□□□ -0.57
RNF4-208ENST00000507247 DRAXINQ8NBI3 349 aaPredicted RBP11.46□□□□□ -0.57
RNF4-208ENST00000507247 ADAD2Q8NCV1 583 aaKnown RBP11.46□□□□□ -0.57
RNF4-208ENST00000507247 BVESQ8NE79 360 aa11.46□□□□□ -0.57
RNF4-208ENST00000507247 DUSP18Q8NEJ0 188 aa11.46□□□□□ -0.57
RNF4-208ENST00000507247 ZFAND1Q8TCF1 268 aa11.46□□□□□ -0.57
RNF4-208ENST00000507247 RTN4IP1Q8WWV3 396 aaPredicted RBP11.46□□□□□ -0.57
RNF4-208ENST00000507247 TMEM230Q96A57 120 aa11.46□□□□□ -0.57
RNF4-208ENST00000507247 RPEQ96AT9 228 aa11.46□□□□□ -0.57
RNF4-208ENST00000507247 RBMXL1Q96E39 390 aaKnown RBP11.46□□□□□ -0.57
RNF4-208ENST00000507247 AKR1E2Q96JD6 320 aa11.46□□□□□ -0.57
RNF4-208ENST00000507247 S1PR3Q99500 378 aa11.46□□□□□ -0.57
RNF4-208ENST00000507247 MRPL20Q9BYC9 149 aaKnown RBP11.46□□□□□ -0.57
RNF4-208ENST00000507247 C20orf85Q9H1P6 137 aa11.46□□□□□ -0.57
RNF4-208ENST00000507247 SLC2A9Q9NRM0 540 aa11.46□□□□□ -0.57
RNF4-208ENST00000507247 NUDT15Q9NV35 164 aa11.46□□□□□ -0.57
RNF4-208ENST00000507247 NF1P21359 2839 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 TRAV6A0A075B6T7 132 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 A0A1W2PPI3 338 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 LINC00473A8K010 186 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 PTTG1O95997 202 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 CT45A6P0DMU7 189 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 CT45A5P0DMU8 189 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 CT45A7P0DMV0 189 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 DUTP33316 252 aaKnown RBP11.45□□□□□ -0.58
RNF4-208ENST00000507247 CEACAM3P40198 252 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 PIGPP57054 158 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 RND3P61587 244 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 SSX2Q16385 188 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 GLDNQ6ZMI3 551 aaPredicted RBP11.45□□□□□ -0.58
RNF4-208ENST00000507247 TGIF2LXQ8IUE1 241 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 ZBTB34Q8NCN2 500 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 C22orf15Q8WYQ4 148 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 ZNF486Q96H40 463 aaPredicted RBP11.45□□□□□ -0.58
RNF4-208ENST00000507247 SCGB3A2Q96PL1 93 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 NABP2Q9BQ15 211 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 COPZ2Q9P299 210 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 C14orf166Q9Y224 244 aaKnown RBP11.45□□□□□ -0.58
RNF4-208ENST00000507247 NUBP2Q9Y5Y2 271 aa11.45□□□□□ -0.58
RNF4-208ENST00000507247 IGHV1-3A0A0C4DH29 117 aa11.44□□□□□ -0.58
RNF4-208ENST00000507247 MDFIC2A0A1B0GVS7 189 aa11.44□□□□□ -0.58
RNF4-208ENST00000507247 PGLYRP1O75594 196 aaPredicted RBP11.44□□□□□ -0.58
RNF4-208ENST00000507247 GAPDHP04406 335 aaKnown RBP11.44□□□□□ -0.58
RNF4-208ENST00000507247 RLN1P04808 185 aa11.44□□□□□ -0.58
RNF4-208ENST00000507247 BPIFB3P59826 476 aa11.44□□□□□ -0.58
RNF4-208ENST00000507247 RGS21Q2M5E4 152 aa11.44□□□□□ -0.58
RNF4-208ENST00000507247 ABCA11PQ4W5N1 156 aa11.44□□□□□ -0.58
RNF4-208ENST00000507247 ZNF66Q6ZN08 573 aa11.44□□□□□ -0.58
RNF4-208ENST00000507247 C9orf139Q6ZV77 190 aa11.44□□□□□ -0.58
RNF4-208ENST00000507247 TMED4Q7Z7H5 227 aa11.44□□□□□ -0.58
RNF4-208ENST00000507247 CMTM1Q8IZ96 169 aa11.44□□□□□ -0.58
RNF4-208ENST00000507247 CENPSQ8N2Z9 138 aa11.44□□□□□ -0.58
RNF4-208ENST00000507247 TEX29Q8N6K0 151 aa11.44□□□□□ -0.58
RNF4-208ENST00000507247 ZNF383Q8NA42 475 aa11.44□□□□□ -0.58
RNF4-208ENST00000507247 MALSU1Q96EH3 234 aa11.44□□□□□ -0.58
RNF4-208ENST00000507247 MS4A7Q9GZW8 240 aaPredicted RBP11.44□□□□□ -0.58
RNF4-208ENST00000507247 IGHV3-72A0A0B4J1Y9 119 aa11.43□□□□□ -0.58
RNF4-208ENST00000507247 OOSP1A8MZH6 123 aa11.43□□□□□ -0.58
RNF4-208ENST00000507247 TIMM23O14925 209 aa11.43□□□□□ -0.58
RNF4-208ENST00000507247 H2AFB2P0C5Z0 115 aa11.43□□□□□ -0.58
RNF4-208ENST00000507247 VSIG10L2P0DP72 767 aa11.43□□□□□ -0.58
RNF4-208ENST00000507247 ANXA7P20073 488 aaKnown RBP11.43□□□□□ -0.58
RNF4-208ENST00000507247 RAB25P57735 213 aa11.43□□□□□ -0.58
RNF4-208ENST00000507247 OXA1LQ15070 435 aa11.43□□□□□ -0.58
RNF4-208ENST00000507247 CCBE1Q6UXH8 406 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms