RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 SNX29P2Q8IUI4 249 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 OR2T10Q8NGZ9 312 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 AKR1E2Q96JD6 320 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 ZNF747Q9BV97 191 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 PRSS22Q9GZN4 317 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 GHITMQ9H3K2 345 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 SERTAD4Q9NUC0 356 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 ZNF221Q9UK13 617 aa14.47□□□□□ -0.09
NPHP4-210ENST00000506941 MOSP00540 346 aa14.46□□□□□ -0.09
NPHP4-210ENST00000506941 LINC00205P59089 165 aa14.46□□□□□ -0.09
NPHP4-210ENST00000506941 C11orf88Q6PI97 169 aa14.46□□□□□ -0.09
NPHP4-210ENST00000506941 FAM131AQ6UXB0 335 aa14.46□□□□□ -0.09
NPHP4-210ENST00000506941 C5orf56Q8N8D9 126 aa14.46□□□□□ -0.09
NPHP4-210ENST00000506941 DRAXINQ8NBI3 349 aaPredicted RBP14.46□□□□□ -0.09
NPHP4-210ENST00000506941 OR2T6Q8NHC8 308 aa14.46□□□□□ -0.09
NPHP4-210ENST00000506941 GPX8Q8TED1 209 aa14.46□□□□□ -0.09
NPHP4-210ENST00000506941 IFT46Q9NQC8 304 aa14.46□□□□□ -0.09
NPHP4-210ENST00000506941 PLSCR3Q9NRY6 295 aa14.46□□□□□ -0.09
NPHP4-210ENST00000506941 EXTL2Q9UBQ6 330 aa14.46□□□□□ -0.09
NPHP4-210ENST00000506941 PKD1L1Q8TDX9 2849 aa14.46□□□□□ -0.1
NPHP4-210ENST00000506941 IGKV1D-13A0A0B4J2D9 117 aa14.45□□□□□ -0.1
NPHP4-210ENST00000506941 HAX1O00165 279 aa14.45□□□□□ -0.1
NPHP4-210ENST00000506941 RGS5O15539 181 aa14.45□□□□□ -0.1
NPHP4-210ENST00000506941 TUSC2O75896 110 aa14.45□□□□□ -0.1
NPHP4-210ENST00000506941 IGKV1-13P0DP09 117 aa14.45□□□□□ -0.1
NPHP4-210ENST00000506941 ARPC4P59998 168 aa14.45□□□□□ -0.1
NPHP4-210ENST00000506941 TET2Q6N021 2002 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-210ENST00000506941 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.45□□□□□ -0.1
NPHP4-210ENST00000506941 RITA1Q96K30 269 aa14.45□□□□□ -0.1
NPHP4-210ENST00000506941 SDHAF2Q9NX18 166 aa14.45□□□□□ -0.1
NPHP4-210ENST00000506941 RSL24D1Q9UHA3 163 aaKnown RBP14.45□□□□□ -0.1
NPHP4-210ENST00000506941 ADAM30Q9UKF2 790 aa14.45□□□□□ -0.1
NPHP4-210ENST00000506941 OR2W1Q9Y3N9 320 aa14.45□□□□□ -0.1
NPHP4-210ENST00000506941 VWFP04275 2813 aa14.45□□□□□ -0.1
NPHP4-210ENST00000506941 H0YJW9 148 aa14.44□□□□□ -0.1
NPHP4-210ENST00000506941 J3QRK9 145 aa14.44□□□□□ -0.1
NPHP4-210ENST00000506941 M0QZK8 103 aa14.44□□□□□ -0.1
NPHP4-210ENST00000506941 M0R1X1 148 aa14.44□□□□□ -0.1
NPHP4-210ENST00000506941 FGF16O43320 207 aa14.44□□□□□ -0.1
NPHP4-210ENST00000506941 NAT1P18440 290 aa14.44□□□□□ -0.1
NPHP4-210ENST00000506941 F2RL1P55085 397 aa14.44□□□□□ -0.1
NPHP4-210ENST00000506941 ZNF383Q8NA42 475 aa14.44□□□□□ -0.1
NPHP4-210ENST00000506941 OR5AP2Q8NGF4 316 aa14.44□□□□□ -0.1
NPHP4-210ENST00000506941 NXF2Q9GZY0 626 aaKnown RBP14.44□□□□□ -0.1
NPHP4-210ENST00000506941 SCPEP1Q9HB40 452 aa14.44□□□□□ -0.1
NPHP4-210ENST00000506941 GAB2Q9UQC2 676 aa14.44□□□□□ -0.1
NPHP4-210ENST00000506941 TRRAPQ9Y4A5 3859 aa14.44□□□□□ -0.1
NPHP4-210ENST00000506941 OR5H14A6NHG9 310 aa14.43□□□□□ -0.1
NPHP4-210ENST00000506941 ZNF701M0R085 212 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-210ENST00000506941 CNTFRP26992 372 aa14.43□□□□□ -0.1
NPHP4-210ENST00000506941 Q8N9W7 124 aa14.43□□□□□ -0.1
NPHP4-210ENST00000506941 OR5AN1Q8NGI8 311 aa14.43□□□□□ -0.1
NPHP4-210ENST00000506941 ABHD1Q96SE0 405 aa14.43□□□□□ -0.1
NPHP4-210ENST00000506941 DCUN1D5Q9BTE7 237 aa14.43□□□□□ -0.1
NPHP4-210ENST00000506941 C6orf62Q9GZU0 229 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-210ENST00000506941 NECAP2Q9NVZ3 263 aa14.43□□□□□ -0.1
NPHP4-210ENST00000506941 RBM7Q9Y580 266 aaKnown RBP14.43□□□□□ -0.1
NPHP4-210ENST00000506941 CMYA5Q8N3K9 4069 aa14.43□□□□□ -0.1
NPHP4-210ENST00000506941 NCBP2LA6PVI3 153 aaKnown RBP14.42□□□□□ -0.1
NPHP4-210ENST00000506941 IGLV2-14P01704 120 aa14.42□□□□□ -0.1
NPHP4-210ENST00000506941 OR5H8P0DN80 308 aa14.42□□□□□ -0.1
NPHP4-210ENST00000506941 AADACP22760 399 aa14.42□□□□□ -0.1
NPHP4-210ENST00000506941 FCGR2CP31995 323 aa14.42□□□□□ -0.1
NPHP4-210ENST00000506941 VDAC2P45880 294 aaPredicted RBP14.42□□□□□ -0.1
NPHP4-210ENST00000506941 LUMP51884 338 aaPredicted RBP14.42□□□□□ -0.1
NPHP4-210ENST00000506941 ACTBP60709 375 aa14.42□□□□□ -0.1
NPHP4-210ENST00000506941 CDK10Q15131 360 aa14.42□□□□□ -0.1
NPHP4-210ENST00000506941 RNASE12Q5GAN4 147 aaKnown RBP14.42□□□□□ -0.1
NPHP4-210ENST00000506941 C9orf152Q5JTZ5 239 aa14.42□□□□□ -0.1
NPHP4-210ENST00000506941 LYSMD2Q8IV50 215 aa14.42□□□□□ -0.1
NPHP4-210ENST00000506941 FAM71E2Q8N5Q1 922 aa14.42□□□□□ -0.1
NPHP4-210ENST00000506941 KLHDC1Q8N7A1 406 aa14.42□□□□□ -0.1
NPHP4-210ENST00000506941 SULT1C2O00338 296 aa14.41□□□□□ -0.1
NPHP4-210ENST00000506941 VSIG10L2P0DP72 767 aa14.41□□□□□ -0.1
NPHP4-210ENST00000506941 RFX2P48378 723 aa14.41□□□□□ -0.1
NPHP4-210ENST00000506941 ARSJQ5FYB0 599 aaPredicted RBP14.41□□□□□ -0.1
NPHP4-210ENST00000506941 SHISA2Q6UWI4 295 aa14.41□□□□□ -0.1
NPHP4-210ENST00000506941 ZNF645Q8N7E2 425 aa14.41□□□□□ -0.1
NPHP4-210ENST00000506941 MCFD2Q8NI22 146 aa14.41□□□□□ -0.1
NPHP4-210ENST00000506941 WIPF2Q8TF74 440 aaPredicted RBP14.41□□□□□ -0.1
NPHP4-210ENST00000506941 CITED1Q99966 193 aa14.41□□□□□ -0.1
NPHP4-210ENST00000506941 WASHC3Q9Y3C0 194 aa14.41□□□□□ -0.1
NPHP4-210ENST00000506941 TPPPO94811 219 aa14.4□□□□□ -0.1
NPHP4-210ENST00000506941 PMP2P02689 132 aa14.4□□□□□ -0.1
NPHP4-210ENST00000506941 IGKV1-16P04430 117 aa14.4□□□□□ -0.1
NPHP4-210ENST00000506941 MMDQ15546 238 aa14.4□□□□□ -0.1
NPHP4-210ENST00000506941 FOXB2Q5VYV0 432 aa14.4□□□□□ -0.1
NPHP4-210ENST00000506941 ZNF660Q6AZW8 331 aaPredicted RBP14.4□□□□□ -0.1
NPHP4-210ENST00000506941 HIST2H2BDQ6DRA6 164 aa14.4□□□□□ -0.1
NPHP4-210ENST00000506941 OVCH2Q7RTZ1 564 aa14.4□□□□□ -0.1
NPHP4-210ENST00000506941 OR8H1Q8NGG4 311 aa14.4□□□□□ -0.1
NPHP4-210ENST00000506941 OR52I2Q8NH67 350 aa14.4□□□□□ -0.1
NPHP4-210ENST00000506941 DIRAS2Q96HU8 199 aa14.4□□□□□ -0.1
NPHP4-210ENST00000506941 WNT10AQ9GZT5 417 aa14.4□□□□□ -0.1
NPHP4-210ENST00000506941 EHFQ9NZC4 300 aa14.4□□□□□ -0.1
NPHP4-210ENST00000506941 DPPA5A6NC42 116 aa14.39□□□□□ -0.11
NPHP4-210ENST00000506941 LINC00473A8K010 186 aa14.39□□□□□ -0.11
NPHP4-210ENST00000506941 H7C2Y5 167 aa14.39□□□□□ -0.11
NPHP4-210ENST00000506941 PPYP01298 95 aa14.39□□□□□ -0.11
NPHP4-210ENST00000506941 HLA-DMAP28067 261 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms