RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 FDX2Q6P4F2 183 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 RPL22L1Q6P5R6 122 aaKnown RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 CD200R1LQ6Q8B3 271 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 SLC25A26Q70HW3 274 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 LHFPL3Q86UP9 236 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 SERPINA12Q8IW75 414 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 LINC00528Q8N1L1 170 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 PRSS35Q8N3Z0 413 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 SVOPQ8N4V2 548 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 CHST4Q8NCG5 386 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 BPIFB6Q8NFQ5 453 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 OR8H1Q8NGG4 311 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 OR51A2Q8NGJ7 313 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 OR52B4Q8NGK2 314 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 OR5D14Q8NGL3 314 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 OR14K1Q8NGZ2 314 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 NEK7Q8TDX7 302 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 TNFAIP8L1Q8WVP5 186 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 APH1BQ8WW43 257 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 CACNG8Q8WXS5 425 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 RFT1Q96AA3 541 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 ADAT3Q96EY9 351 aaPredicted RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 PELI1Q96FA3 418 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 TMEM80Q96HE8 168 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 SNX22Q96L94 193 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 MS4A10Q96PG2 267 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 SLC29A1Q99808 456 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 PDCD1LG2Q9BQ51 273 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 YTHDF1Q9BYJ9 559 aaKnown RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 ANKRD60Q9BZ19 345 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 CCDC90BQ9GZT6 254 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 CHST6Q9GZX3 395 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 CST11Q9H112 138 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 RHOFQ9HBH0 211 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 VCX3AQ9NNX9 186 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 AMBNQ9NP70 447 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 RAB9BQ9NP90 201 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 FGF20Q9NP95 211 aaPredicted RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 TAS2R4Q9NYW5 299 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 TAS2R3Q9NYW6 316 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 IL36RNQ9UBH0 155 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 MLXQ9UH92 298 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 PSG11Q9UQ72 335 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 EXOGQ9Y2C4 368 aaKnown RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 TPRKBQ9Y3C4 175 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 DMRT1Q9Y5R6 373 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 A0A1B0GTI1 187 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 OR4C45A6NMZ5 311 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 H0YJX3 145 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 SIRPB1O00241 398 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 HSPB6O14558 160 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 SH2D1BO14796 132 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 MGST3O14880 152 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 RGS10O43665 173 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 AIREO43918 545 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 WBP4O75554 376 aaKnown RBP2.34□□□□□ -2.03
TCOF1-208ENST00000506063 ARL6IP5O75915 188 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 OR7C1O76099 320 aaPredicted RBP2.34□□□□□ -2.03
TCOF1-208ENST00000506063 INMTO95050 263 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 MT-ND2P03891 347 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 CDK1P06493 297 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 GNAO1P09471 354 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 GIG44P09565 113 aaPredicted RBP2.34□□□□□ -2.03
TCOF1-208ENST00000506063 LIMS3P0CW19 117 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 LIMS4P0CW20 117 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 HSMCR30P0CW71 290 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 TMEM225BP0DP42 221 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 BCL3P20749 454 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 SERPINA2P20848 420 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 MYL9P24844 172 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 BDKRB2P30411 391 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 ADMP35318 185 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF93P35789 620 aaPredicted RBP2.34□□□□□ -2.03
TCOF1-208ENST00000506063 P2RX3P56373 397 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 NANOS3P60323 173 aaKnown RBP2.34□□□□□ -2.03
TCOF1-208ENST00000506063 GABARAPL2P60520 117 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 EFNB1P98172 346 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 DEFA5Q01523 94 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 ST3GAL4Q11206 333 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 GPR176Q14439 515 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 IL13RA2Q14627 380 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 ATXN7L3Q14CW9 347 aaPredicted RBP2.34□□□□□ -2.03
TCOF1-208ENST00000506063 TRAM1Q15629 374 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 KISS1Q15726 138 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 TBCEQ15813 527 aaPredicted RBP2.34□□□□□ -2.03
TCOF1-208ENST00000506063 SMN1Q16637 294 aaKnown RBP2.34□□□□□ -2.03
TCOF1-208ENST00000506063 MPV17LQ2QL34 196 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 TMEM30BQ3MIR4 351 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 MOGAT2Q3SYC2 334 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 HSD17B12Q53GQ0 312 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 OR2G6Q5TZ20 316 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 PYHIN1Q6K0P9 492 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 Q6ZSR3 168 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 MOB3BQ86TA1 216 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 ANGPTL5Q86XS5 388 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 SAXO1Q8IYX7 474 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 FAM58AQ8N1B3 248 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 JAGN1Q8N5M9 183 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 PARP16Q8N5Y8 322 aa2.34□□□□□ -2.03
TCOF1-208ENST00000506063 TCTEX1D1Q8N7M0 179 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms