RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 LFNGQ8NES3 379 aa16.21■□□□□ 0.19
SQSTM1-210ENST00000506042 OR5AN1Q8NGI8 311 aa16.21■□□□□ 0.19
SQSTM1-210ENST00000506042 SULT4A1Q9BR01 284 aa16.21■□□□□ 0.19
SQSTM1-210ENST00000506042 FAAP24Q9BTP7 215 aa16.21■□□□□ 0.19
SQSTM1-210ENST00000506042 TUBA4BQ9H853 241 aa16.21■□□□□ 0.19
SQSTM1-210ENST00000506042 H0YJW9 148 aa16.2■□□□□ 0.18
SQSTM1-210ENST00000506042 SOX15O60248 233 aa16.2■□□□□ 0.18
SQSTM1-210ENST00000506042 CT45A6P0DMU7 189 aa16.2■□□□□ 0.18
SQSTM1-210ENST00000506042 CT45A5P0DMU8 189 aa16.2■□□□□ 0.18
SQSTM1-210ENST00000506042 CT45A7P0DMV0 189 aa16.2■□□□□ 0.18
SQSTM1-210ENST00000506042 ARSBP15848 533 aa16.2■□□□□ 0.18
SQSTM1-210ENST00000506042 LGALS7P47929 136 aa16.2■□□□□ 0.18
SQSTM1-210ENST00000506042 RBM48Q5RL73 367 aaKnown RBP16.2■□□□□ 0.18
SQSTM1-210ENST00000506042 LCN12Q6JVE5 192 aa16.2■□□□□ 0.18
SQSTM1-210ENST00000506042 C6orf201Q7Z4U5 140 aa16.2■□□□□ 0.18
SQSTM1-210ENST00000506042 PACRGLQ8N7B6 248 aa16.2■□□□□ 0.18
SQSTM1-210ENST00000506042 CLCC1Q96S66 551 aa16.2■□□□□ 0.18
SQSTM1-210ENST00000506042 JTBO76095 146 aa16.19■□□□□ 0.18
SQSTM1-210ENST00000506042 CA2P00918 260 aa16.19■□□□□ 0.18
SQSTM1-210ENST00000506042 IGLV1-51P01701 117 aa16.19■□□□□ 0.18
SQSTM1-210ENST00000506042 HTR2CP28335 458 aa16.19■□□□□ 0.18
SQSTM1-210ENST00000506042 CEACAM6P40199 344 aa16.19■□□□□ 0.18
SQSTM1-210ENST00000506042 NDPQ00604 133 aa16.19■□□□□ 0.18
SQSTM1-210ENST00000506042 TAGLNQ01995 201 aaKnown RBP16.19■□□□□ 0.18
SQSTM1-210ENST00000506042 RPL39P5Q59GN2 51 aa16.19■□□□□ 0.18
SQSTM1-210ENST00000506042 C8orf59Q8N0T1 100 aaPredicted RBP16.19■□□□□ 0.18
SQSTM1-210ENST00000506042 POC5Q8NA72 575 aa16.19■□□□□ 0.18
SQSTM1-210ENST00000506042 GRPEL2Q8TAA5 225 aa16.19■□□□□ 0.18
SQSTM1-210ENST00000506042 RHOVQ96L33 236 aa16.19■□□□□ 0.18
SQSTM1-210ENST00000506042 TPSG1Q9NRR2 321 aa16.19■□□□□ 0.18
SQSTM1-210ENST00000506042 FBXO7Q9Y3I1 522 aa16.19■□□□□ 0.18
SQSTM1-210ENST00000506042 DNAH9Q9NYC9 4486 aa16.19■□□□□ 0.18
SQSTM1-210ENST00000506042 NAPSAO96009 420 aa16.18■□□□□ 0.18
SQSTM1-210ENST00000506042 SERPINB10P48595 397 aa16.18■□□□□ 0.18
SQSTM1-210ENST00000506042 FXYD3Q14802 87 aa16.18■□□□□ 0.18
SQSTM1-210ENST00000506042 PSG5Q15238 335 aa16.18■□□□□ 0.18
SQSTM1-210ENST00000506042 CASTOR1Q8WTX7 329 aa16.18■□□□□ 0.18
SQSTM1-210ENST00000506042 ABHD14BQ96IU4 210 aa16.18■□□□□ 0.18
SQSTM1-210ENST00000506042 TM2D1Q9BX74 207 aa16.18■□□□□ 0.18
SQSTM1-210ENST00000506042 C12orf4Q9NQ89 552 aa16.18■□□□□ 0.18
SQSTM1-210ENST00000506042 A0A0B4J203 849 aa16.17■□□□□ 0.18
SQSTM1-210ENST00000506042 VEGFCP49767 419 aa16.17■□□□□ 0.18
SQSTM1-210ENST00000506042 HLA-DRB3P79483 266 aa16.17■□□□□ 0.18
SQSTM1-210ENST00000506042 ACSM3Q53FZ2 586 aa16.17■□□□□ 0.18
SQSTM1-210ENST00000506042 ZFAND6Q6FIF0 208 aa16.17■□□□□ 0.18
SQSTM1-210ENST00000506042 GLDNQ6ZMI3 551 aaPredicted RBP16.17■□□□□ 0.18
SQSTM1-210ENST00000506042 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.17■□□□□ 0.18
SQSTM1-210ENST00000506042 ZNF485Q8NCK3 441 aa16.17■□□□□ 0.18
SQSTM1-210ENST00000506042 OR6M1Q8NGM8 313 aa16.17■□□□□ 0.18
SQSTM1-210ENST00000506042 GGHQ92820 318 aa16.17■□□□□ 0.18
SQSTM1-210ENST00000506042 FAM103A1Q9BTL3 118 aaKnown RBP16.17■□□□□ 0.18
SQSTM1-210ENST00000506042 CENPOQ9BU64 300 aa16.17■□□□□ 0.18
SQSTM1-210ENST00000506042 MND1Q9BWT6 205 aa16.17■□□□□ 0.18
SQSTM1-210ENST00000506042 PEMTQ9UBM1 199 aa16.17■□□□□ 0.18
SQSTM1-210ENST00000506042 STAB2Q8WWQ8 2551 aa16.16■□□□□ 0.18
SQSTM1-210ENST00000506042 TRBV6-6A0A0A6YYG2 114 aa16.16■□□□□ 0.18
SQSTM1-210ENST00000506042 HSD17B12Q53GQ0 312 aa16.16■□□□□ 0.18
SQSTM1-210ENST00000506042 C1orf100Q5SVJ3 147 aa16.16■□□□□ 0.18
SQSTM1-210ENST00000506042 ZNF880Q6PDB4 577 aa16.16■□□□□ 0.18
SQSTM1-210ENST00000506042 AHSA2Q719I0 299 aa16.16■□□□□ 0.18
SQSTM1-210ENST00000506042 Q8N402 240 aa16.16■□□□□ 0.18
SQSTM1-210ENST00000506042 OR9G4Q8NGQ1 327 aa16.16■□□□□ 0.18
SQSTM1-210ENST00000506042 USMG5Q96IX5 58 aa16.16■□□□□ 0.18
SQSTM1-210ENST00000506042 VCXQ9H320 206 aa16.16■□□□□ 0.18
SQSTM1-210ENST00000506042 PLGRKTQ9HBL7 147 aa16.16■□□□□ 0.18
SQSTM1-210ENST00000506042 FCN1O00602 326 aa16.15■□□□□ 0.18
SQSTM1-210ENST00000506042 FAM209BQ5JX69 171 aa16.15■□□□□ 0.18
SQSTM1-210ENST00000506042 PTX4Q96A99 478 aa16.15■□□□□ 0.18
SQSTM1-210ENST00000506042 RBMXL1Q96E39 390 aaKnown RBP16.15■□□□□ 0.18
SQSTM1-210ENST00000506042 PHB2Q99623 299 aa16.15■□□□□ 0.18
SQSTM1-210ENST00000506042 C11orf54Q9H0W9 315 aaPredicted RBP16.15■□□□□ 0.18
SQSTM1-210ENST00000506042 C19orf73Q9NVV2 129 aa16.15■□□□□ 0.18
SQSTM1-210ENST00000506042 HSF4Q9ULV5 492 aa16.15■□□□□ 0.18
SQSTM1-210ENST00000506042 SLC25A17O43808 307 aa16.14■□□□□ 0.17
SQSTM1-210ENST00000506042 CREBL2O60519 120 aaPredicted RBP16.14■□□□□ 0.17
SQSTM1-210ENST00000506042 RRASP10301 218 aa16.14■□□□□ 0.17
SQSTM1-210ENST00000506042 SRMP19623 302 aa16.14■□□□□ 0.17
SQSTM1-210ENST00000506042 TPBGQ13641 420 aa16.14■□□□□ 0.17
SQSTM1-210ENST00000506042 RTL8BQ17RB0 113 aa16.14■□□□□ 0.17
SQSTM1-210ENST00000506042 RPEL1Q2QD12 228 aa16.14■□□□□ 0.17
SQSTM1-210ENST00000506042 NANOGP1Q8N7R0 232 aa16.14■□□□□ 0.17
SQSTM1-210ENST00000506042 OR2K2Q8NGT1 345 aa16.14■□□□□ 0.17
SQSTM1-210ENST00000506042 SLC35D1Q9NTN3 355 aa16.14■□□□□ 0.17
SQSTM1-210ENST00000506042 ANKRD34BA5PLL1 514 aa16.13■□□□□ 0.17
SQSTM1-210ENST00000506042 AIREO43918 545 aa16.13■□□□□ 0.17
SQSTM1-210ENST00000506042 EGR2P11161 476 aaPredicted RBP16.13■□□□□ 0.17
SQSTM1-210ENST00000506042 SNAPC3Q92966 411 aa16.13■□□□□ 0.17
SQSTM1-210ENST00000506042 CMSS1Q9BQ75 279 aaKnown RBP16.13■□□□□ 0.17
SQSTM1-210ENST00000506042 AGMATQ9BSE5 352 aa16.13■□□□□ 0.17
SQSTM1-210ENST00000506042 TMED9Q9BVK6 235 aa16.13■□□□□ 0.17
SQSTM1-210ENST00000506042 PLCXD1Q9NUJ7 323 aa16.13■□□□□ 0.17
SQSTM1-210ENST00000506042 PEF1Q9UBV8 284 aaKnown RBP16.13■□□□□ 0.17
SQSTM1-210ENST00000506042 PSORS1C1Q9UIG5 152 aa16.13■□□□□ 0.17
SQSTM1-210ENST00000506042 GAB2Q9UQC2 676 aa16.13■□□□□ 0.17
SQSTM1-210ENST00000506042 M0R1X1 148 aa16.12■□□□□ 0.17
SQSTM1-210ENST00000506042 MPPED1O15442 326 aa16.12■□□□□ 0.17
SQSTM1-210ENST00000506042 ARL6IP5O75915 188 aa16.12■□□□□ 0.17
SQSTM1-210ENST00000506042 OR2A4O95047 310 aa16.12■□□□□ 0.17
SQSTM1-210ENST00000506042 BRI3O95415 125 aa16.12■□□□□ 0.17
SQSTM1-210ENST00000506042 OR10K2Q6IF99 312 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms