RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 LINC00473A8K010 186 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 CTSDP07339 412 aaPredicted RBP6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 MADCAM1Q13477 382 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 ARFRP1Q13795 201 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 IL18Q14116 193 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 CCDC144NLQ6NUI1 221 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 FAM131AQ6UXB0 335 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 GALNT14Q96FL9 552 aa6.62□□□□□ -1.35
CDC42SE2-208ENST00000505065 DNAJC9-AS1A6NH13 148 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 FGF16O43320 207 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 CHST1O43916 411 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 CEACAM3P40198 252 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 RFX2P48378 723 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 UBA52P62987 128 aaKnown RBP6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 CHRFAM7AQ494W8 412 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 ZNF818PQ6ZRF7 136 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 PDPNQ86YL7 162 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 RNF152Q8N8N0 203 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 OR8H1Q8NGG4 311 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 ST6GALNAC5Q9BVH7 336 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 VPREB3Q9UKI3 123 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 OR2F2O95006 317 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 GAPDHP04406 335 aaKnown RBP6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 ARHGDIBP52566 201 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 UBE2MP61081 183 aaKnown RBP6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 SPANXN2Q5MJ10 180 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 DHRS7BQ6IAN0 325 aaPredicted RBP6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 SNX29P2Q8IUI4 249 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 TERB2Q8NHR7 220 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 LEAP2Q969E1 77 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 ADTRPQ96IZ2 230 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 C5orf66Q9H5L9 145 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 FBP1P09467 338 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 RPL30P62888 115 aaKnown RBP6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 SUPT4H1P63272 117 aaKnown RBP6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 ZNF585BQ52M93 769 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 ZNF782Q6ZMW2 699 aaPredicted RBP6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 SIGLECL1Q8N7X8 197 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 RFESDQ8TAC1 157 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 HSD17B10Q99714 261 aaKnown RBP6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 MAST4O15021 2626 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 SPG11Q96JI7 2443 aa6.61□□□□□ -1.35
CDC42SE2-208ENST00000505065 TMEM89A2RUT3 159 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 CRYM-AS1A6NIL9 109 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 NDUFB6O95139 128 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 RRASP10301 218 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 THBS3P49746 956 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 RAG2P55895 527 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 C5orf56Q8N8D9 126 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 OR5H2Q8NGV7 314 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 WNT10AQ9GZT5 417 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 CHMP1AQ9HD42 196 aaPredicted RBP6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 FN1P02751 2386 aaKnown RBP6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 IGHV3-43A0A0B4J1X8 118 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 INS-IGF2F8WCM5 200 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 PMP2P02689 132 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 IGHV3-43DP0DP04 118 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 VSIG10L2P0DP72 767 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 SRD5A1P18405 259 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 FCGR2CP31995 323 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 KIR2DS2P43631 304 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 LUMP51884 338 aaPredicted RBP6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 DTX3Q8N9I9 347 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 OR2AK2Q8NG84 335 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 MYOZ3Q8TDC0 251 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 SSMEM1Q8WWF3 244 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 MRPL20Q9BYC9 149 aaKnown RBP6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 IFT46Q9NQC8 304 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 VSIG4Q9Y279 399 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 MDFIC2A0A1B0GVS7 189 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 ST8SIA5O15466 376 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 IL3RAP26951 378 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 LPCAT3Q6P1A2 487 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 BRD3OSQ6XYD6 125 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 BORCS5Q969J3 196 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 PHF21AQ96BD5 680 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 ABHD14BQ96IU4 210 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 CCDC160A6NGH7 325 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 DBX1A6NMT0 343 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 RGS5O15539 181 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 PGLYRP1O75594 196 aaPredicted RBP6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 AP3S2P59780 193 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 TGIF2LXQ8IUE1 241 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 Q8N9W7 124 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 ZFAND1Q8TCF1 268 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 NEK7Q8TDX7 302 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 IL22RA2Q969J5 263 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 TMEM56Q96MV1 263 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 PRRT1Q99946 306 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 TMEM56-RWDD3S4R434 201 aa6.6□□□□□ -1.35
CDC42SE2-208ENST00000505065 IGKV1-39P01597 117 aa6.59□□□□□ -1.35
CDC42SE2-208ENST00000505065 IGKV1D-39P04432 117 aa6.59□□□□□ -1.35
CDC42SE2-208ENST00000505065 FCER2P06734 321 aa6.59□□□□□ -1.35
CDC42SE2-208ENST00000505065 MC5RP33032 325 aa6.59□□□□□ -1.35
CDC42SE2-208ENST00000505065 RPL39P5Q59GN2 51 aa6.59□□□□□ -1.35
CDC42SE2-208ENST00000505065 C11orf88Q6PI97 169 aa6.59□□□□□ -1.35
CDC42SE2-208ENST00000505065 IL17RELQ6ZVW7 336 aa6.59□□□□□ -1.35
CDC42SE2-208ENST00000505065 SLC25A21Q9BQT8 299 aaPredicted RBP6.59□□□□□ -1.35
CDC42SE2-208ENST00000505065 ZNF702PQ9H963 129 aa6.59□□□□□ -1.35
CDC42SE2-208ENST00000505065 EHFQ9NZC4 300 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms