RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 GPR146Q96CH1 333 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 PPP1R14DQ9NXH3 145 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 ZNF581Q9P0T4 197 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 LAMA2P24043 3122 aaKnown RBP11.94□□□□□ -0.5
TCOF1-207ENST00000504761 A1L4Q6 167 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 H0Y980 276 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 MT-ND4LP03901 98 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 TAS2R45P59539 299 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 TCF15Q12870 199 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 PRR30Q53SZ7 412 aaPredicted RBP11.94□□□□□ -0.5
TCOF1-207ENST00000504761 Q6ZS92 163 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 HIST2H3AQ71DI3 136 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 SSX8Q7RTT4 187 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 OR13A1Q8NGR1 328 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 OR51I2Q9H344 312 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 PTPN13Q12923 2485 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 IQCF6A8MYZ5 107 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 E9PQ18 207 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 OR10J4P0C629 311 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 KIR2DS2P43631 304 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 IFITM2Q01629 132 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 MMDQ15546 238 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 ACSM6Q6P461 480 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 PHYHIPLQ96FC7 376 aa11.94□□□□□ -0.5
TCOF1-207ENST00000504761 COL4A4P53420 1690 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-207ENST00000504761 LYNX1G3V0Z9 82 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 LYNX1P0DP58 116 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 SULT1A1P50225 295 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 BTNL8Q6UX41 500 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 GLRX5Q86SX6 157 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 DOLPP1Q86YN1 238 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 OR10G4Q8NGN3 311 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 OR10G9Q8NGN4 311 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 OR10G7Q8NGN6 311 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 PLPPR1Q8TBJ4 325 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 GAB2Q9UQC2 676 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 WSB1Q9Y6I7 421 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 SPTBN4Q9H254 2564 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-207ENST00000504761 H7BYZ3 331 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 J3QR06 171 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 ETV2O00321 342 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-207ENST00000504761 SNRPCP09234 159 aaKnown RBP11.93□□□□□ -0.5
TCOF1-207ENST00000504761 THBS3P49746 956 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 OR10A7Q8NGE5 316 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 TMEM147Q9BVK8 224 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 HEXA-AS1Q9H8Q6 139 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 RGS13O14921 159 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 ATP6V0CP27449 155 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 PIP4P1Q86T03 277 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 CACFD1Q9UGQ2 172 aa11.93□□□□□ -0.5
TCOF1-207ENST00000504761 VSTM2AQ8TAG5 236 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 ATP5SQ99766 215 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 NUDT19A8MXV4 375 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 S1PR2O95136 353 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 OR2C1O95371 312 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 ORM2P19652 201 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 APOBEC3AP31941 199 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-207ENST00000504761 RPL39P5Q59GN2 51 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 ZNF645Q8N7E2 425 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 PLSCR4Q9NRQ2 329 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 FKBP11Q9NYL4 201 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 ZNF835Q9Y2P0 537 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 A0A1W2PNU3 283 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-207ENST00000504761 KCNIP4Q6PIL6 250 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 POC1AQ8NBT0 407 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 MMP26Q9NRE1 261 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 CLCF1Q9UBD9 225 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 AMMECR1Q9Y4X0 333 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-207ENST00000504761 PTBP3O95758 552 aaKnown RBP11.92□□□□□ -0.5
TCOF1-207ENST00000504761 FABP1P07148 127 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 UBE2G1P62253 170 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 ZNF660Q6AZW8 331 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-207ENST00000504761 TMEM65Q6PI78 240 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 DBX2Q6ZNG2 339 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 SELENOHQ8IZQ5 122 aaKnown RBP11.92□□□□□ -0.5
TCOF1-207ENST00000504761 RTBDNQ9BSG5 229 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-207ENST00000504761 PATZ1Q9HBE1 687 aaKnown RBP11.92□□□□□ -0.5
TCOF1-207ENST00000504761 TMEM106BQ9NUM4 274 aa11.92□□□□□ -0.5
TCOF1-207ENST00000504761 PGA5P0DJD9 388 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 CD200P41217 278 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 TMEM187Q14656 261 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 PRR27Q6MZM9 219 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 C2CD4CQ8TF44 421 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 RSG1Q9BU20 258 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 PTPRSQ13332 1948 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 CDK2AP1O14519 115 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 DEDDO75618 318 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 HPRT1P00492 218 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 Q56UQ5 140 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 FAM89BQ8N5H3 189 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 LINC00052Q96N35 136 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 LPAR3Q9UBY5 353 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 B9A039 149 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 SIGLEC5O15389 551 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 OR2A4O95047 310 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 NPY1RP25929 384 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 BPIFB3P59826 476 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 WDR82Q6UXN9 313 aa11.91□□□□□ -0.5
TCOF1-207ENST00000504761 OR2A7Q96R45 310 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms