RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 TAF9BQ9HBM6 251 aa14.48□□□□□ -0.09
SQSTM1-209ENST00000504627 NUBP2Q9Y5Y2 271 aa14.48□□□□□ -0.09
SQSTM1-209ENST00000504627 NOTCH1P46531 2555 aa14.48□□□□□ -0.09
SQSTM1-209ENST00000504627 TET2Q6N021 2002 aaPredicted RBP14.48□□□□□ -0.09
SQSTM1-209ENST00000504627 C12orf77C9JDV5 145 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 MMP23AO75900 390 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 NDUFB6O95139 128 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 SCTP09683 121 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 GZMHP20718 246 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 HTR1DP28221 377 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 ECI1P42126 302 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 CCR6P51684 374 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 TMEM30BQ3MIR4 351 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 PRAMEF5Q5TYX0 476 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 IDO2Q6ZQW0 420 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 LHFPL1Q86WI0 220 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 ABHD12Q8N2K0 398 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 ZNF565Q8N9K5 539 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 CORO2AQ92828 525 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 CREB3L1Q96BA8 519 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 SLC25A21Q9BQT8 299 aaPredicted RBP14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 PRSS22Q9GZN4 317 aa14.47□□□□□ -0.09
SQSTM1-209ENST00000504627 TRAV39A0A0B4J263 110 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 C15orf65H3BRN8 121 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 SPINT2O43291 252 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 TCRBP04435 133 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 SPNP16150 400 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 DYNLT3P51808 116 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 TSPAN5P62079 268 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 HABP2Q14520 560 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 SCGB2B2Q4G0G5 96 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 IGSF11Q5DX21 431 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 ZNF660Q6AZW8 331 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 HIST2H2BDQ6DRA6 164 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 OR13C8Q8NGS7 320 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 ZNF596Q8TC21 504 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 GALMQ96C23 342 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 KIRREL1Q96J84 757 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 GINS4Q9BRT9 223 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 C20orf85Q9H1P6 137 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 ZNF702PQ9H963 129 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 TAS2R3Q9NYW6 316 aa14.46□□□□□ -0.09
SQSTM1-209ENST00000504627 TRBV6-7A0A0A0MS04 114 aa14.45□□□□□ -0.1
SQSTM1-209ENST00000504627 IGKV1-6A0A0C4DH72 117 aa14.45□□□□□ -0.1
SQSTM1-209ENST00000504627 FAM172BPA6NC97 362 aa14.45□□□□□ -0.1
SQSTM1-209ENST00000504627 ZNF729A6NN14 1252 aaPredicted RBP14.45□□□□□ -0.1
SQSTM1-209ENST00000504627 SDCBPO00560 298 aaPredicted RBP14.45□□□□□ -0.1
SQSTM1-209ENST00000504627 TOR1AO14656 332 aa14.45□□□□□ -0.1
SQSTM1-209ENST00000504627 HBZP02008 142 aa14.45□□□□□ -0.1
SQSTM1-209ENST00000504627 SSTR5P35346 364 aa14.45□□□□□ -0.1
SQSTM1-209ENST00000504627 HEPN1Q6WQI6 88 aa14.45□□□□□ -0.1
SQSTM1-209ENST00000504627 OR4P4Q8NGL7 312 aa14.45□□□□□ -0.1
SQSTM1-209ENST00000504627 OR6F1Q8NGZ6 308 aa14.45□□□□□ -0.1
SQSTM1-209ENST00000504627 CFHR4Q92496 578 aa14.45□□□□□ -0.1
SQSTM1-209ENST00000504627 LINC00574Q9H8X3 128 aa14.45□□□□□ -0.1
SQSTM1-209ENST00000504627 NUDT15Q9NV35 164 aa14.45□□□□□ -0.1
SQSTM1-209ENST00000504627 CALYQ9NYX4 217 aa14.45□□□□□ -0.1
SQSTM1-209ENST00000504627 BET1O15155 118 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 BRS3P32247 399 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 ARHGDIBP52566 201 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 HTD2P86397 168 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 SURF2Q15527 256 aaPredicted RBP14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 DHRS11Q6UWP2 260 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 Q6ZNX1 250 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 C1QL4Q86Z23 238 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 OR10J5Q8NHC4 309 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 TERB2Q8NHR7 220 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 CAPSLQ8WWF8 208 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 GIMAP1Q8WWP7 306 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 ARL11Q969Q4 196 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 SCGB3A2Q96PL1 93 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 ZNF2Q9BSG1 426 aaPredicted RBP14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 MARVELD1Q9BSK0 173 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 MMP28Q9H239 520 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 SERTAD4Q9NUC0 356 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 DPM3Q9P2X0 92 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 JPT1Q9UK76 154 aa14.44□□□□□ -0.1
SQSTM1-209ENST00000504627 KBTBD11-OT1A0A1B0GTJ5 212 aa14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 FBXO24O75426 580 aa14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 TUSC2O75896 110 aa14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 CGB3P0DN86 165 aa14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 CGB7P0DN87 165 aa14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 FCGR2CP31995 323 aa14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 HERV-K104P61576 105 aa14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 AADACL3Q5VUY0 350 aa14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 H1FOOQ8IZA3 346 aaPredicted RBP14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 Q8N2B8 174 aa14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 PRR18Q8N4B5 295 aa14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 OR1L1Q8NH94 360 aa14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 IL1F10Q8WWZ1 152 aa14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 MOB3AQ96BX8 217 aa14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 TOLLIPQ9H0E2 274 aa14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 FXYD6Q9H0Q3 95 aa14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 SLC23A1Q9UHI7 598 aa14.43□□□□□ -0.1
SQSTM1-209ENST00000504627 LEUTXA8MZ59 168 aa14.42□□□□□ -0.1
SQSTM1-209ENST00000504627 HSPA12AO43301 675 aa14.42□□□□□ -0.1
SQSTM1-209ENST00000504627 PPYP01298 95 aa14.42□□□□□ -0.1
SQSTM1-209ENST00000504627 ZBTB25P24278 435 aa14.42□□□□□ -0.1
SQSTM1-209ENST00000504627 NFYBP25208 207 aa14.42□□□□□ -0.1
SQSTM1-209ENST00000504627 CEACAM3P40198 252 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms