RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 OR5H2Q8NGV7 314 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 OR56B4Q8NH76 319 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 SMIM4Q8WVI0 70 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 CAPSLQ8WWF8 208 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 GIMAP1Q8WWP7 306 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 TMEM158Q8WZ71 300 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 KLK11Q9UBX7 282 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 ZNF107Q9UII5 783 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 RNF150Q9ULK6 438 aa9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 RBM7Q9Y580 266 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-208ENST00000504489 TNCP24821 2201 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 GSTZ1O43708 216 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 PROP1O75360 226 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 SLC22A5O76082 557 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 PMP2P02689 132 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 FAM106CPP0CH98 169 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 TBPP20226 339 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 CD24P25063 80 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 HLA-DMAP28067 261 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 FCGR2CP31995 323 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 RFX2P48378 723 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 LSAMPQ13449 338 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 EBI3Q14213 229 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 CNPY1Q3B7I2 92 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 ACTBL2Q562R1 376 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 RPL39P5Q59GN2 51 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 RNASE12Q5GAN4 147 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 ZNF660Q6AZW8 331 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 DHRS11Q6UWP2 260 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 FAM131AQ6UXB0 335 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 CCBE1Q6UXH8 406 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 C16orf82Q7Z2V1 217 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 NABP2Q9BQ15 211 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 MRPL20Q9BYC9 149 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 OR2D2Q9H210 308 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 RAB18Q9NP72 206 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 EHFQ9NZC4 300 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 RBMX2Q9Y388 322 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 V9GYH0 126 aa9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 FBN1P35555 2871 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-208ENST00000504489 COL6A5A8TX70 2615 aa9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 IGKV1D-13A0A0B4J2D9 117 aa9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 ZNF736B4DX44 427 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 PPYP01298 95 aa9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 CRYBA1P05813 215 aa9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 SNRNP70P08621 437 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 CT45A6P0DMU7 189 aa9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 CT45A5P0DMU8 189 aa9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 CT45A7P0DMV0 189 aa9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 IGKV1-13P0DP09 117 aa9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 AADACP22760 399 aa9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 HRH1P35367 487 aa9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 SPANXN2Q5MJ10 180 aa9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 VAX1Q5SQQ9 334 aa9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 LINC00299Q6ZSB3 139 aa9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 ZNF645Q8N7E2 425 aa9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 TMEM229BQ8NBD8 167 aa9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 SDHAF2Q9NX18 166 aa9.53□□□□□ -0.88
PDLIM5-208ENST00000504489 IGHV3-72A0A0B4J1Y9 119 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 CHST1O43916 411 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 IGKV1D-33P01593 117 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 IGKV1-33P01594 117 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 CD74P04233 296 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 HKR1P10072 659 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 MC5RP33032 325 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 TAS2R19P59542 299 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 MSMO1Q15800 293 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 ZNF79Q15937 498 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 FBLN7Q53RD9 439 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 DHRS7BQ6IAN0 325 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 TMEM219Q86XT9 240 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 Q8N6K4 173 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 OR5AN1Q8NGI8 311 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 OR6F1Q8NGZ6 308 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 OR2T10Q8NGZ9 312 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 EAF1Q96JC9 268 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 RBM14Q96PK6 669 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 C19orf24Q9BVV8 132 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 TAS2R8Q9NYW2 309 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 C1RLQ9NZP8 487 aa9.52□□□□□ -0.89
PDLIM5-208ENST00000504489 TMEM89A2RUT3 159 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 OR5H14A6NHG9 310 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 A6NJY4 79 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 RNF212BA8MTL3 300 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 J3QRK9 145 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 M0R1X1 148 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 OR2F2O95006 317 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 NDUFA7O95182 113 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 MOSP00540 346 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 CD3DP04234 171 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 TMEM11P17152 192 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 HERV-K104P61576 105 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 TSPAN5P62079 268 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 HES1Q14469 280 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 PYDC2Q56P42 97 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 RNASE10Q5GAN6 216 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 C5orf30Q96GV9 206 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 ADTRPQ96IZ2 230 aa9.51□□□□□ -0.89
PDLIM5-208ENST00000504489 AKR1E2Q96JD6 320 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms