RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ZNF524Q96C55 264 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 SIGMAR1Q99720 223 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 C5orf66Q9H5L9 145 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 SAP30LQ9HAJ7 183 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 PILRBQ9UKJ0 227 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 MCTS1Q9ULC4 181 aaKnown RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 HIVEP2P31629 2446 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 MAP1AP78559 2803 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 IGLV1-36A0A0B4J1U3 117 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 DPRXA6NFQ7 191 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 TMPRSS11DO60235 418 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 RAB31Q13636 194 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 SGCBQ16585 318 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 WDR38Q5JTN6 314 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 OR9G4Q8NGQ1 327 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 SLC25A40Q8TBP6 338 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 DNAJA3Q96EY1 480 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 SIGLEC12Q96PQ1 595 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 HSPB9Q9BQS6 159 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 OR10A2Q9H208 303 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF160Q9HCG1 818 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 PHPT1Q9NRX4 125 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 NECAP2Q9NVZ3 263 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 GNG13Q9P2W3 67 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 ST3GAL6Q9Y274 331 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 POLR1DQ9Y2S0 133 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 CRYM-AS1A6NIL9 109 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 OR5B21A6NL26 309 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 ALOX12BO75342 701 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 PCCBP05166 539 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 SERPINE2P07093 398 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 PSMB5P28074 263 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 TSPOP30536 169 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 ARL3P36405 182 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 GNG4P50150 75 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 NANOS3P60323 173 aaKnown RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 RPS15AP62244 130 aaKnown RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 SRSF6Q13247 344 aaKnown RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 EBI3Q14213 229 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 RTL8BQ17RB0 113 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 ACTL10Q5JWF8 245 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 CST9LP1Q5W188 147 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM182Q6ZP80 229 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 DOK3Q7L591 496 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM123Q8N131 208 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 PNPLA1Q8N8W4 532 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 NECAP1Q8NC96 275 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 IL17FQ96PD4 163 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 GOLGA2P5Q9HBQ8 144 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 ABT1Q9ULW3 272 aaKnown RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 OR1A2Q9Y585 309 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 SOX21Q9Y651 276 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 SPTA1P02549 2419 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 TRBV23OR9-2A0A075B6M9 112 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF891A8MT65 544 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 GRXCR1A8MXD5 290 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 PEX12O00623 359 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 GPX1P07203 203 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 VSIG8P0DPA2 414 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 GABRG2P18507 467 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 ANOS1P23352 680 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 IL3RAP26951 378 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 CTSOP43234 321 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 FGF8P55075 233 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 SRSF3P84103 164 aaKnown RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 GUCA2AQ02747 115 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 HSD52Q0P140 79 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM267Q0VDI3 215 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 OR10J3Q5JRS4 329 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 FFAR4Q5NUL3 377 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 C1orf162Q8NEQ5 155 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 SGMS2Q8NHU3 365 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 NMNAT3Q96T66 252 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 RPRMQ9NS64 109 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 MED29Q9NX70 200 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 PPIAL4AQ9Y536 164 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 TIMM13Q9Y5L4 95 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 UTP20O75691 2785 aaKnown RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 IGHV2-26A0A0B4J1V2 119 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 C2CD4DB7Z1M9 353 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 M0R296 226 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 B3GALT2O43825 422 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 CSN1S1P47710 185 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 FOXL2P58012 376 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 MRPS34P82930 218 aaKnown RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 TPTE2P1Q5T6R2 138 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM144Q7Z5S9 345 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 OR5C1Q8NGR4 320 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 OR10AG1Q8NH19 301 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 ZCCHC10Q8TBK6 192 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 NABP1Q96AH0 204 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 C8orf44Q96CB5 159 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 C5orf30Q96GV9 206 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 EAF1Q96JC9 268 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 LRRC61Q9BV99 259 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 MMP25Q9NPA2 562 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 HEYLQ9NQ87 328 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-204ENST00000503468 UNC80Q8N2C7 3258 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 MEGF8Q7Z7M0 2845 aa2.38□□□□□ -2.03
NEDD4-204ENST00000503468 A0A0D9SEW6 157 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms