RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ROS1P08922 2347 aa18.17■□□□□ 0.5
PTPN13-205ENST00000502971 A0A0G2JRQ6 117 aa18.17■□□□□ 0.5
PTPN13-205ENST00000502971 GPR137BO60478 399 aa18.17■□□□□ 0.5
PTPN13-205ENST00000502971 IGKV1-5P01602 117 aa18.17■□□□□ 0.5
PTPN13-205ENST00000502971 TPT1P13693 172 aaKnown RBP18.17■□□□□ 0.5
PTPN13-205ENST00000502971 MMP9P14780 707 aa18.17■□□□□ 0.5
PTPN13-205ENST00000502971 AKR1C2P52895 323 aa18.17■□□□□ 0.5
PTPN13-205ENST00000502971 LYPD2Q6UXB3 125 aa18.17■□□□□ 0.5
PTPN13-205ENST00000502971 BTNL3Q6UXE8 466 aa18.17■□□□□ 0.5
PTPN13-205ENST00000502971 FGFRL1Q8N441 504 aa18.17■□□□□ 0.5
PTPN13-205ENST00000502971 C11orf1Q9H5F2 150 aa18.17■□□□□ 0.5
PTPN13-205ENST00000502971 DSCAML1Q8TD84 2053 aa18.16■□□□□ 0.5
PTPN13-205ENST00000502971 ZNF134P52741 427 aa18.16■□□□□ 0.5
PTPN13-205ENST00000502971 RPL31P62899 125 aaKnown RBP18.16■□□□□ 0.5
PTPN13-205ENST00000502971 CXorf66Q5JRM2 361 aaPredicted RBP18.16■□□□□ 0.5
PTPN13-205ENST00000502971 ABHD14AQ9BUJ0 271 aa18.16■□□□□ 0.5
PTPN13-205ENST00000502971 IFI27L2Q9H2X8 130 aa18.16■□□□□ 0.5
PTPN13-205ENST00000502971 COL8A2P25067 703 aa18.15■□□□□ 0.5
PTPN13-205ENST00000502971 EIF5AP63241 154 aaKnown RBP18.15■□□□□ 0.5
PTPN13-205ENST00000502971 C11orf71Q6IPW1 123 aa18.15■□□□□ 0.5
PTPN13-205ENST00000502971 SPAG16Q8N0X2 631 aa18.15■□□□□ 0.5
PTPN13-205ENST00000502971 CD300LFQ8TDQ1 290 aa18.15■□□□□ 0.5
PTPN13-205ENST00000502971 C19orf12Q9NSK7 152 aa18.15■□□□□ 0.5
PTPN13-205ENST00000502971 MMP24Q9Y5R2 645 aa18.15■□□□□ 0.5
PTPN13-205ENST00000502971 ADGRG4Q8IZF6 3080 aa18.15■□□□□ 0.5
PTPN13-205ENST00000502971 EPHA1P21709 976 aa18.15■□□□□ 0.5
PTPN13-205ENST00000502971 DUTP33316 252 aaKnown RBP18.15■□□□□ 0.5
PTPN13-205ENST00000502971 POLR2GP62487 172 aaKnown RBP eCLIP18.15■□□□□ 0.5
PTPN13-205ENST00000502971 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.15■□□□□ 0.5
PTPN13-205ENST00000502971 CTSZQ9UBR2 303 aa18.15■□□□□ 0.5
PTPN13-205ENST00000502971 RPUSD1Q9UJJ7 312 aaKnown RBP18.15■□□□□ 0.5
PTPN13-205ENST00000502971 LAMP3Q9UQV4 416 aa18.15■□□□□ 0.5
PTPN13-205ENST00000502971 C17orf98A8MV24 154 aa18.14■□□□□ 0.49
PTPN13-205ENST00000502971 RAMP3O60896 148 aa18.14■□□□□ 0.49
PTPN13-205ENST00000502971 FCN3O75636 299 aa18.14■□□□□ 0.49
PTPN13-205ENST00000502971 CT45A1Q5HYN5 189 aa18.14■□□□□ 0.49
PTPN13-205ENST00000502971 BAP18Q8IXM2 172 aa18.14■□□□□ 0.49
PTPN13-205ENST00000502971 CT45A3Q8NHU0 189 aa18.14■□□□□ 0.49
PTPN13-205ENST00000502971 SLC25A32Q9H2D1 315 aa18.14■□□□□ 0.49
PTPN13-205ENST00000502971 CACNG5Q9UF02 275 aa18.14■□□□□ 0.49
PTPN13-205ENST00000502971 LINC00473A8K010 186 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 DVL1O14640 695 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 PROP1O75360 226 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 NFYBP25208 207 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 TMEM33P57088 247 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 BRWD1-AS2P59051 145 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 VAMP2P63027 116 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 ZNF273Q14593 569 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 TMEM200BQ69YZ2 307 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 Q6ZRM9 215 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 DTX2Q86UW9 622 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 ZNF439Q8NDP4 499 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 NEU4Q8WWR8 484 aaPredicted RBP18.13■□□□□ 0.49
PTPN13-205ENST00000502971 ZNF714Q96N38 554 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 COA4Q9NYJ1 87 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 AUP1Q9Y679 476 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 SPTBN1Q01082 2364 aaKnown RBP18.13■□□□□ 0.49
PTPN13-205ENST00000502971 PKDREJQ9NTG1 2253 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 MYO18BQ8IUG5 2567 aa18.13■□□□□ 0.49
PTPN13-205ENST00000502971 WRBO00258 174 aa18.12■□□□□ 0.49
PTPN13-205ENST00000502971 SLC31A2O15432 143 aa18.12■□□□□ 0.49
PTPN13-205ENST00000502971 MRPS11P82912 194 aaKnown RBP18.12■□□□□ 0.49
PTPN13-205ENST00000502971 ZNF816Q0VGE8 651 aaPredicted RBP18.12■□□□□ 0.49
PTPN13-205ENST00000502971 OR2B11Q5JQS5 317 aa18.12■□□□□ 0.49
PTPN13-205ENST00000502971 OR2C3Q8N628 320 aa18.12■□□□□ 0.49
PTPN13-205ENST00000502971 KIAA1324LA8MWY0 1029 aaPredicted RBP18.12■□□□□ 0.49
PTPN13-205ENST00000502971 M0R1X1 148 aa18.12■□□□□ 0.49
PTPN13-205ENST00000502971 RAB29O14966 203 aa18.12■□□□□ 0.49
PTPN13-205ENST00000502971 SSSCA1O60232 199 aa18.12■□□□□ 0.49
PTPN13-205ENST00000502971 IGHV2-70P01814 119 aa18.12■□□□□ 0.49
PTPN13-205ENST00000502971 GAPDHP04406 335 aaKnown RBP18.12■□□□□ 0.49
PTPN13-205ENST00000502971 NMBP08949 121 aa18.12■□□□□ 0.49
PTPN13-205ENST00000502971 DANCRP0C864 163 aa18.12■□□□□ 0.49
PTPN13-205ENST00000502971 DAOP14920 347 aa18.12■□□□□ 0.49
PTPN13-205ENST00000502971 PRAMEF5Q5TYX0 476 aa18.12■□□□□ 0.49
PTPN13-205ENST00000502971 PCNPQ8WW12 178 aaKnown RBP18.12■□□□□ 0.49
PTPN13-205ENST00000502971 H1FXQ92522 213 aaKnown RBP18.12■□□□□ 0.49
PTPN13-205ENST00000502971 LEAP2Q969E1 77 aa18.12■□□□□ 0.49
PTPN13-205ENST00000502971 FAM210AQ96ND0 272 aa18.12■□□□□ 0.49
PTPN13-205ENST00000502971 MAGT1Q9H0U3 335 aa18.12■□□□□ 0.49
PTPN13-205ENST00000502971 FBXL17Q9UF56 701 aa18.12■□□□□ 0.49
PTPN13-205ENST00000502971 LYNX1G3V0Z9 82 aa18.11■□□□□ 0.49
PTPN13-205ENST00000502971 S1PR2O95136 353 aa18.11■□□□□ 0.49
PTPN13-205ENST00000502971 IGHV3-7P01780 117 aa18.11■□□□□ 0.49
PTPN13-205ENST00000502971 SOD3P08294 240 aa18.11■□□□□ 0.49
PTPN13-205ENST00000502971 LYNX1P0DP58 116 aa18.11■□□□□ 0.49
PTPN13-205ENST00000502971 KIR2DS2P43631 304 aa18.11■□□□□ 0.49
PTPN13-205ENST00000502971 NCR3LG1Q68D85 454 aa18.11■□□□□ 0.49
PTPN13-205ENST00000502971 HEPN1Q6WQI6 88 aa18.11■□□□□ 0.49
PTPN13-205ENST00000502971 SLC25A31Q9H0C2 315 aa18.11■□□□□ 0.49
PTPN13-205ENST00000502971 LYRM2Q9NU23 88 aaPredicted RBP18.11■□□□□ 0.49
PTPN13-205ENST00000502971 CHST1O43916 411 aa18.1■□□□□ 0.49
PTPN13-205ENST00000502971 MMP23AO75900 390 aa18.1■□□□□ 0.49
PTPN13-205ENST00000502971 JTBO76095 146 aa18.1■□□□□ 0.49
PTPN13-205ENST00000502971 P0C879 139 aa18.1■□□□□ 0.49
PTPN13-205ENST00000502971 IZUMO4Q1ZYL8 232 aa18.1■□□□□ 0.49
PTPN13-205ENST00000502971 RPL39P5Q59GN2 51 aa18.1■□□□□ 0.49
PTPN13-205ENST00000502971 UTF1Q5T230 341 aa18.1■□□□□ 0.49
PTPN13-205ENST00000502971 SLC25A48Q6ZT89 311 aaKnown RBP18.1■□□□□ 0.49
PTPN13-205ENST00000502971 PDZD9Q8IXQ8 264 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms