RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 RAB29O14966 203 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 IAPPP10997 89 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 TNFRSF9Q07011 255 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 AWAT1Q58HT5 328 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 SPSB3Q6PJ21 355 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 SEM1Q6ZVN7 128 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 SSX8Q7RTT4 187 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 ZNF295-AS1Q8N0V1 137 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 ZNF525Q8N782 197 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 OR52L2PQ8NGH6 319 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 RPS10P5Q9NQ39 176 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 FZR1Q9UM11 496 aa10.03□□□□□ -0.8
NUP54-202ENST00000502850 LRRC30A6NM36 301 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 C3orf80F5H4A9 247 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 M0R1B8 84 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 PPIHO43447 177 aaKnown RBP10.02□□□□□ -0.81
NUP54-202ENST00000502850 CLDN1O95832 211 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 P0C879 139 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 ZNF83P51522 516 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 CR1LQ2VPA4 569 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 LRRC75BQ2VPJ9 315 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 RNF212Q495C1 297 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 KHDC3LQ587J8 217 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 ZNF506Q5JVG8 444 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 TMEM14EPQ6UXP3 125 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 THNSL2Q86YJ6 484 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 OR10G4Q8NGN3 311 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 UBALD1Q8TB05 177 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 S100PBPQ96BU1 408 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 PRELID1Q9Y255 219 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 MGAQ8IWI9 3026 aa10.02□□□□□ -0.81
NUP54-202ENST00000502850 INTS1Q8N201 2190 aaKnown RBP10.01□□□□□ -0.81
NUP54-202ENST00000502850 ODAMA1E959 279 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 GPR37O15354 613 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 ZNF737O75373 536 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 IFNA1P01562 189 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 MT-ND4LP03901 98 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 METTL15P1P0C7V9 234 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 NFYBP25208 207 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 KIR2DS2P43631 304 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 GATA4P43694 442 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 GLIPR1P48060 266 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 RAB5BP61020 215 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 RUNX1Q01196 453 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 SLC38A11Q08AI6 406 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 TMEM30BQ3MIR4 351 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 SPANXN5Q5MJ07 72 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 FAM180AQ6UWF9 173 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 H2BFWTQ7Z2G1 175 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 ZNF808Q8N4W9 903 aaPredicted RBP10.01□□□□□ -0.81
NUP54-202ENST00000502850 OR13A1Q8NGR1 328 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 SFT2D1Q8WV19 159 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 MEGF10Q96KG7 1140 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 EGLN1Q9GZT9 426 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 RBKSQ9H477 322 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 BIN3Q9NQY0 253 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 OR6C3Q9NZP0 311 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 DUSP13Q9UII6 198 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 FAM215AQ9Y5M1 114 aa10.01□□□□□ -0.81
NUP54-202ENST00000502850 IGLV3-9A0A075B6K5 115 aa10□□□□□ -0.81
NUP54-202ENST00000502850 C7orf77A4D0Y5 90 aa10□□□□□ -0.81
NUP54-202ENST00000502850 MKRN2OSH3BPM6 223 aa10□□□□□ -0.81
NUP54-202ENST00000502850 C15orf65H3BRN8 121 aa10□□□□□ -0.81
NUP54-202ENST00000502850 ITGB1BP1O14713 200 aa10□□□□□ -0.81
NUP54-202ENST00000502850 RBFOX2O43251 390 aaKnown RBP eCLIP10□□□□□ -0.81
NUP54-202ENST00000502850 SOX15O60248 233 aa10□□□□□ -0.81
NUP54-202ENST00000502850 YPEL1O60688 119 aa10□□□□□ -0.81
NUP54-202ENST00000502850 WISP2O76076 250 aa10□□□□□ -0.81
NUP54-202ENST00000502850 MBP02144 154 aa10□□□□□ -0.81
NUP54-202ENST00000502850 SNRNP70P08621 437 aaKnown RBP10□□□□□ -0.81
NUP54-202ENST00000502850 TNFSF4P23510 183 aa10□□□□□ -0.81
NUP54-202ENST00000502850 CEACAM8P31997 349 aaPredicted RBP10□□□□□ -0.81
NUP54-202ENST00000502850 TAGLN2P37802 199 aaKnown RBP10□□□□□ -0.81
NUP54-202ENST00000502850 GPR12P47775 334 aa10□□□□□ -0.81
NUP54-202ENST00000502850 RAB13P51153 203 aa10□□□□□ -0.81
NUP54-202ENST00000502850 NKX6-1P78426 367 aaPredicted RBP10□□□□□ -0.81
NUP54-202ENST00000502850 TMEM41BQ5BJD5 291 aa10□□□□□ -0.81
NUP54-202ENST00000502850 SP5Q6BEB4 398 aaPredicted RBP10□□□□□ -0.81
NUP54-202ENST00000502850 ZNF474Q6S9Z5 364 aaPredicted RBP10□□□□□ -0.81
NUP54-202ENST00000502850 CD177Q8N6Q3 437 aa10□□□□□ -0.81
NUP54-202ENST00000502850 FAM57AQ8TBR7 257 aa10□□□□□ -0.81
NUP54-202ENST00000502850 RXFP4Q8TDU9 374 aa10□□□□□ -0.81
NUP54-202ENST00000502850 C14orf79Q96F83 325 aa10□□□□□ -0.81
NUP54-202ENST00000502850 YPEL2Q96QA6 119 aa10□□□□□ -0.81
NUP54-202ENST00000502850 TMEM147Q9BVK8 224 aa10□□□□□ -0.81
NUP54-202ENST00000502850 MRPL37Q9BZE1 423 aaKnown RBP10□□□□□ -0.81
NUP54-202ENST00000502850 WDR61Q9GZS3 305 aaKnown RBP10□□□□□ -0.81
NUP54-202ENST00000502850 COLCA2A8K830 154 aa10□□□□□ -0.81
NUP54-202ENST00000502850 S1PR2O95136 353 aa10□□□□□ -0.81
NUP54-202ENST00000502850 KRASP01116 189 aa10□□□□□ -0.81
NUP54-202ENST00000502850 SSTR5P35346 364 aa10□□□□□ -0.81
NUP54-202ENST00000502850 RAB7AP51149 207 aa10□□□□□ -0.81
NUP54-202ENST00000502850 RPP30P78346 268 aaKnown RBP10□□□□□ -0.81
NUP54-202ENST00000502850 ZNF816Q0VGE8 651 aaPredicted RBP10□□□□□ -0.81
NUP54-202ENST00000502850 EDDM3AQ14507 147 aa10□□□□□ -0.81
NUP54-202ENST00000502850 IZUMO4Q1ZYL8 232 aa10□□□□□ -0.81
NUP54-202ENST00000502850 Q3ZCU0 254 aa10□□□□□ -0.81
NUP54-202ENST00000502850 GCSAMQ8N6F7 178 aa10□□□□□ -0.81
NUP54-202ENST00000502850 CLDND2Q8NHS1 167 aa10□□□□□ -0.81
NUP54-202ENST00000502850 MBD3L1Q8WWY6 194 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms