RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 SNAPC3Q92966 411 aa8.79□□□□□ -1
CDK9-205ENST00000498339 ABHD14BQ96IU4 210 aa8.79□□□□□ -1
CDK9-205ENST00000498339 OVOL2Q9BRP0 275 aa8.79□□□□□ -1
CDK9-205ENST00000498339 GGTLC1Q9BX51 225 aa8.79□□□□□ -1
CDK9-205ENST00000498339 ERVK13-1Q9NX77 482 aa8.79□□□□□ -1
CDK9-205ENST00000498339 OAZ3Q9UMX2 235 aa8.79□□□□□ -1
CDK9-205ENST00000498339 ORC6Q9Y5N6 252 aa8.79□□□□□ -1
CDK9-205ENST00000498339 SC5DO75845 299 aa8.78□□□□□ -1
CDK9-205ENST00000498339 NDUFB8O95169 186 aa8.78□□□□□ -1
CDK9-205ENST00000498339 APOA2P02652 100 aa8.78□□□□□ -1
CDK9-205ENST00000498339 MGMTP16455 207 aa8.78□□□□□ -1
CDK9-205ENST00000498339 FUT3P21217 361 aa8.78□□□□□ -1
CDK9-205ENST00000498339 LY6G6FQ5SQ64 297 aa8.78□□□□□ -1
CDK9-205ENST00000498339 DRAXINQ8NBI3 349 aaPredicted RBP8.78□□□□□ -1
CDK9-205ENST00000498339 WDR89Q96FK6 387 aaPredicted RBP8.78□□□□□ -1
CDK9-205ENST00000498339 USMG5Q96IX5 58 aa8.78□□□□□ -1
CDK9-205ENST00000498339 CYYR1Q96J86 154 aa8.78□□□□□ -1
CDK9-205ENST00000498339 RNF5Q99942 180 aa8.78□□□□□ -1
CDK9-205ENST00000498339 TINAGL1Q9GZM7 467 aaPredicted RBP8.78□□□□□ -1
CDK9-205ENST00000498339 PARP12Q9H0J9 701 aaKnown RBP8.78□□□□□ -1
CDK9-205ENST00000498339 CHMP1AQ9HD42 196 aaPredicted RBP8.78□□□□□ -1
CDK9-205ENST00000498339 AASSQ9UDR5 926 aa8.78□□□□□ -1
CDK9-205ENST00000498339 LRRC42Q9Y546 428 aa8.78□□□□□ -1
CDK9-205ENST00000498339 SELENOKQ9Y6D0 94 aa8.78□□□□□ -1
CDK9-205ENST00000498339 LOC102724200A0A096LPH7 203 aaPredicted RBP8.77□□□□□ -1.01
CDK9-205ENST00000498339 SAC3D1A6NKF1 404 aa8.77□□□□□ -1.01
CDK9-205ENST00000498339 ZNF785A8K8V0 405 aa8.77□□□□□ -1.01
CDK9-205ENST00000498339 MPPED1O15442 326 aa8.77□□□□□ -1.01
CDK9-205ENST00000498339 PDCD6O75340 191 aa8.77□□□□□ -1.01
CDK9-205ENST00000498339 GPX5O75715 221 aa8.77□□□□□ -1.01
CDK9-205ENST00000498339 IGKV1-16P04430 117 aa8.77□□□□□ -1.01
CDK9-205ENST00000498339 FCGR1AP12314 374 aa8.77□□□□□ -1.01
CDK9-205ENST00000498339 SNRPGP62308 76 aaKnown RBP8.77□□□□□ -1.01
CDK9-205ENST00000498339 HMGN3Q15651 99 aa8.77□□□□□ -1.01
CDK9-205ENST00000498339 LYG2Q86SG7 212 aa8.77□□□□□ -1.01
CDK9-205ENST00000498339 CCDC197Q8NCU1 140 aa8.77□□□□□ -1.01
CDK9-205ENST00000498339 OR5AN1Q8NGI8 311 aa8.77□□□□□ -1.01
CDK9-205ENST00000498339 OR13C5Q8NGS8 318 aa8.77□□□□□ -1.01
CDK9-205ENST00000498339 THRSPQ92748 146 aa8.77□□□□□ -1.01
CDK9-205ENST00000498339 FAM46BQ96A09 425 aa8.77□□□□□ -1.01
CDK9-205ENST00000498339 FAM90A7PA6NKC0 464 aa8.76□□□□□ -1.01
CDK9-205ENST00000498339 FAM90A23PA8MXZ1 464 aa8.76□□□□□ -1.01
CDK9-205ENST00000498339 TUSC2O75896 110 aa8.76□□□□□ -1.01
CDK9-205ENST00000498339 GLAP06280 429 aa8.76□□□□□ -1.01
CDK9-205ENST00000498339 MECP2P51608 486 aaKnown RBP8.76□□□□□ -1.01
CDK9-205ENST00000498339 EWSR1Q01844 656 aaKnown RBP eCLIP8.76□□□□□ -1.01
CDK9-205ENST00000498339 EXOSC2Q13868 293 aaKnown RBP8.76□□□□□ -1.01
CDK9-205ENST00000498339 DEFB114Q30KQ6 69 aa8.76□□□□□ -1.01
CDK9-205ENST00000498339 LGALS9CQ6DKI2 356 aa8.76□□□□□ -1.01
CDK9-205ENST00000498339 PDPNQ86YL7 162 aa8.76□□□□□ -1.01
CDK9-205ENST00000498339 OR52B4Q8NGK2 314 aa8.76□□□□□ -1.01
CDK9-205ENST00000498339 Q96M66 194 aa8.76□□□□□ -1.01
CDK9-205ENST00000498339 TMEM68Q96MH6 324 aa8.76□□□□□ -1.01
CDK9-205ENST00000498339 AMBNQ9NP70 447 aa8.76□□□□□ -1.01
CDK9-205ENST00000498339 AP4S1Q9Y587 144 aa8.76□□□□□ -1.01
CDK9-205ENST00000498339 GMPPBQ9Y5P6 360 aa8.76□□□□□ -1.01
CDK9-205ENST00000498339 BMPR1BO00238 502 aa8.75□□□□□ -1.01
CDK9-205ENST00000498339 FOLR2P14207 255 aa8.75□□□□□ -1.01
CDK9-205ENST00000498339 EDN2P20800 178 aa8.75□□□□□ -1.01
CDK9-205ENST00000498339 PJVKQ0ZLH3 352 aa8.75□□□□□ -1.01
CDK9-205ENST00000498339 ZIK1Q3SY52 487 aaPredicted RBP8.75□□□□□ -1.01
CDK9-205ENST00000498339 SLC25A30Q5SVS4 291 aa8.75□□□□□ -1.01
CDK9-205ENST00000498339 XAF1Q6GPH4 301 aa8.75□□□□□ -1.01
CDK9-205ENST00000498339 SIGIRRQ6IA17 410 aa8.75□□□□□ -1.01
CDK9-205ENST00000498339 RPL22L1Q6P5R6 122 aaKnown RBP8.75□□□□□ -1.01
CDK9-205ENST00000498339 OR52I1Q8NGK6 324 aa8.75□□□□□ -1.01
CDK9-205ENST00000498339 EDARADDQ8WWZ3 215 aa8.75□□□□□ -1.01
CDK9-205ENST00000498339 NEDD4LQ96PU5 975 aa8.75□□□□□ -1.01
CDK9-205ENST00000498339 SLC35D1Q9NTN3 355 aa8.75□□□□□ -1.01
CDK9-205ENST00000498339 ZNF221Q9UK13 617 aa8.75□□□□□ -1.01
CDK9-205ENST00000498339 DNAH6Q9C0G6 4158 aa8.75□□□□□ -1.01
CDK9-205ENST00000498339 TRAV8-7A0A075B6U6 113 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 C2orf70A6NJV1 201 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 IGFBP3P17936 291 aaPredicted RBP8.74□□□□□ -1.01
CDK9-205ENST00000498339 BMI1P35226 326 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 SSBP2P81877 361 aaPredicted RBP8.74□□□□□ -1.01
CDK9-205ENST00000498339 RHOGP84095 191 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 ATP5G2Q06055 141 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 TNFRSF9Q07011 255 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 DEFB135Q30KP9 77 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 CCDC58Q4VC31 144 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 TMEM217Q8N7C4 229 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 ZNF383Q8NA42 475 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 PHLDA1Q8WV24 401 aaPredicted RBP8.74□□□□□ -1.01
CDK9-205ENST00000498339 SMIM19Q96E16 107 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 HARBI1Q96MB7 349 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 OR14A2Q96R54 314 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 SULT4A1Q9BR01 284 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 ZC4H2Q9NQZ6 224 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 TECRQ9NZ01 308 aaKnown RBP8.74□□□□□ -1.01
CDK9-205ENST00000498339 ABCA13Q86UQ4 5058 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 VPS13DQ5THJ4 4388 aa8.74□□□□□ -1.01
CDK9-205ENST00000498339 A0A1W2PPK0 400 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 FAM223BA6NKX1 122 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 PPP5D1E7EU14 171 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 M0R1X1 148 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 SPRY2O43597 315 aa8.73□□□□□ -1.01
CDK9-205ENST00000498339 RBMXL2O75526 392 aaKnown RBP8.73□□□□□ -1.01
CDK9-205ENST00000498339 SCAF4O95104 1147 aaKnown RBP8.73□□□□□ -1.01
CDK9-205ENST00000498339 PRH1P02810 166 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms