RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 IFNA21P01568 189 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 OR8U9P0C7N5 309 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 RNF224P0DH78 156 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 DAOP14920 347 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 NDUFB7P17568 137 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 PPP1CCP36873 323 aaKnown RBP6.3□□□□□ -1.4
CDC42-205ENST00000498236 EFNA4P52798 201 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 NKX2-5P52952 324 aaPredicted RBP6.3□□□□□ -1.4
CDC42-205ENST00000498236 RPL31P62899 125 aaKnown RBP6.3□□□□□ -1.4
CDC42-205ENST00000498236 IL15RAQ13261 267 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 GNMTQ14749 295 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 MORN2Q502X0 79 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 ESCO2Q56NI9 601 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 TMEM65Q6PI78 240 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 LYPD2Q6UXB3 125 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 C9orf62Q8N4C0 152 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 C8orf31Q8N9H6 132 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 CLEC18CQ8NCF0 446 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 OR11H4Q8NGC9 324 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 OR8U1Q8NH10 309 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 RFESDQ8TAC1 157 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 UBALD1Q8TB05 177 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 RAB1CQ92928 201 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 TIMD4Q96H15 378 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 C2orf50Q96LR7 162 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 TP53RKQ96S44 253 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 PARP12Q9H0J9 701 aaKnown RBP6.3□□□□□ -1.4
CDC42-205ENST00000498236 GAL3ST2Q9H3Q3 398 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 PLEKHF2Q9H8W4 249 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 UBTD1Q9HAC8 227 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 GNG12Q9UBI6 72 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 CTSZQ9UBR2 303 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 MIOXQ9UGB7 285 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 TMED3Q9Y3Q3 217 aa6.3□□□□□ -1.4
CDC42-205ENST00000498236 KMT2BQ9UMN6 2715 aaPredicted RBP6.3□□□□□ -1.4
CDC42-205ENST00000498236 USP9XQ93008 2570 aaPredicted RBP6.29□□□□□ -1.4
CDC42-205ENST00000498236 PHF1O43189 567 aaPredicted RBP6.29□□□□□ -1.4
CDC42-205ENST00000498236 ADAP1O75689 374 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 TSPAN15O95858 294 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 SLC25A4P12235 298 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 RPA2P15927 270 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 RAB7AP51149 207 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 LINC00310P59036 64 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 SRSF1Q07955 248 aaKnown RBP eCLIP6.29□□□□□ -1.4
CDC42-205ENST00000498236 SP6Q3SY56 376 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 Q5BKY6 102 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 LAMTOR1Q6IAA8 161 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 HEPN1Q6WQI6 88 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 ZNF66Q6ZN08 573 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 ZNF841Q6ZN19 808 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 DRAM1Q8N682 238 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.29□□□□□ -1.4
CDC42-205ENST00000498236 C8orf46Q8TAG6 207 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 ZNF714Q96N38 554 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 PDCD10Q9BUL8 212 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 OR2D2Q9H210 308 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 METTL8Q9H825 291 aaKnown RBP6.29□□□□□ -1.4
CDC42-205ENST00000498236 C19orf12Q9NSK7 152 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 LIN7CQ9NUP9 197 aaKnown RBP6.29□□□□□ -1.4
CDC42-205ENST00000498236 IDI2-AS1Q9NZ38 188 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 RPUSD1Q9UJJ7 312 aaKnown RBP6.29□□□□□ -1.4
CDC42-205ENST00000498236 RALYQ9UKM9 306 aaKnown RBP6.29□□□□□ -1.4
CDC42-205ENST00000498236 RBM7Q9Y580 266 aaKnown RBP6.29□□□□□ -1.4
CDC42-205ENST00000498236 HRNRQ86YZ3 2850 aaPredicted RBP6.29□□□□□ -1.4
CDC42-205ENST00000498236 FLNCQ14315 2725 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 DSCAML1Q8TD84 2053 aa6.29□□□□□ -1.4
CDC42-205ENST00000498236 MYO18BQ8IUG5 2567 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 A0A087X0M5 115 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 TRAV14DV4A0A0A6YYC5 116 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 A0A1B0GX30 115 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 C5orf51A6NDU8 294 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 FAM25EA8MYX2 175 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 F5H0A9 414 aaPredicted RBP6.28□□□□□ -1.4
CDC42-205ENST00000498236 LYNX1G3V0Z9 82 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 CCSO14618 274 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 RBP4P02753 201 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 HOXB5P09067 269 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 LYNX1P0DP58 116 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 SLC25A6P12236 298 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 LYL1P12980 280 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 VDAC1P21796 283 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 PSMB6P28072 239 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 DLX6P56179 175 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 ZNF273Q14593 569 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 TMEM268Q5VZI3 342 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 GGNBP1Q5YKI7 109 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 LYZL2Q7Z4W2 148 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 SELENOHQ8IZQ5 122 aaKnown RBP6.28□□□□□ -1.4
CDC42-205ENST00000498236 FGFRL1Q8N441 504 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 ZNF439Q8NDP4 499 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 SVIPQ8NHG7 77 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 LHFPL5Q8TAF8 219 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 ZNF596Q8TC21 504 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 PPP1R1CQ8WVI7 109 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 RBPMSQ93062 196 aaKnown RBP6.28□□□□□ -1.4
CDC42-205ENST00000498236 RAB39BQ96DA2 213 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 NEIL1Q96FI4 390 aaPredicted RBP6.28□□□□□ -1.4
CDC42-205ENST00000498236 SEC22AQ96IW7 307 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 OR10C1Q96KK4 312 aa6.28□□□□□ -1.4
CDC42-205ENST00000498236 HSD17B10Q99714 261 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms