RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ASCL5Q7RTU5 278 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 HAPLN4Q86UW8 402 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 THNSL2Q86YJ6 484 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 LILRB2Q8N423 598 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 ZNF525Q8N782 197 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 AGMATQ9BSE5 352 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 RBKSQ9H477 322 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 FBXO7Q9Y3I1 522 aa10.87□□□□□ -0.67
GARNL3-220ENST00000496711 DSPP15924 2871 aaKnown RBP10.87□□□□□ -0.67
GARNL3-220ENST00000496711 LINC00473A8K010 186 aa10.86□□□□□ -0.67
GARNL3-220ENST00000496711 NFYBP25208 207 aa10.86□□□□□ -0.67
GARNL3-220ENST00000496711 BRWD1-AS2P59051 145 aa10.86□□□□□ -0.67
GARNL3-220ENST00000496711 TLE4Q04727 773 aa10.86□□□□□ -0.67
GARNL3-220ENST00000496711 ARL16Q0P5N6 197 aa10.86□□□□□ -0.67
GARNL3-220ENST00000496711 LTC4SQ16873 150 aa10.86□□□□□ -0.67
GARNL3-220ENST00000496711 CR1LQ2VPA4 569 aa10.86□□□□□ -0.67
GARNL3-220ENST00000496711 HFEQ30201 348 aa10.86□□□□□ -0.67
GARNL3-220ENST00000496711 SPANXN5Q5MJ07 72 aa10.86□□□□□ -0.67
GARNL3-220ENST00000496711 SCGB1C1Q8TD33 95 aa10.86□□□□□ -0.67
GARNL3-220ENST00000496711 SMDT1Q9H4I9 107 aa10.86□□□□□ -0.67
GARNL3-220ENST00000496711 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.86□□□□□ -0.67
GARNL3-220ENST00000496711 KIAA1456Q9P272 454 aa10.86□□□□□ -0.67
GARNL3-220ENST00000496711 GNG12Q9UBI6 72 aa10.86□□□□□ -0.67
GARNL3-220ENST00000496711 HCFC1P51610 2035 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 A0A0G2JNJ9 132 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 LRRC30A6NM36 301 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 RAB29O14966 203 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 GPR12P47775 334 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 TNFAIP6P98066 277 aaPredicted RBP10.85□□□□□ -0.67
GARNL3-220ENST00000496711 SMUG1Q53HV7 270 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 C22orf34Q6ZV56 151 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 ZGRF1Q86YA3 2104 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 DOLPP1Q86YN1 238 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 KDF1Q8NAX2 398 aaPredicted RBP10.85□□□□□ -0.67
GARNL3-220ENST00000496711 ZNRF1Q8ND25 227 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 NUP37Q8NFH4 326 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 C14orf79Q96F83 325 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 PSMG3Q9BT73 122 aaPredicted RBP10.85□□□□□ -0.67
GARNL3-220ENST00000496711 PARD6GQ9BYG4 376 aaPredicted RBP10.85□□□□□ -0.67
GARNL3-220ENST00000496711 SLC35B3Q9H1N7 401 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 Q9UFV3 132 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 IL19Q9UHD0 177 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 SSUH2Q9Y2M2 353 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 DYSFO75923 2080 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 F2RL2O00254 374 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 PPIHO43447 177 aaKnown RBP10.85□□□□□ -0.67
GARNL3-220ENST00000496711 YPEL1O60688 119 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 IGHV1-46P01743 117 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 HBE1P02100 147 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 OR8U8P0C7N1 319 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 EDDM3BP56851 147 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 RAB2AP61019 212 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 FOXC1Q12948 553 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 MORN2Q502X0 79 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 TMEM14EPQ6UXP3 125 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 H2BFWTQ7Z2G1 175 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 ZNF561Q8N587 486 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 Q8NA96 180 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 CD300LFQ8TDQ1 290 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 FAM222BQ8WU58 562 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 YPEL2Q96QA6 119 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 HIPK2Q9H2X6 1198 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 ELOVL5Q9NYP7 299 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 OR6C3Q9NZP0 311 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 RNF7Q9UBF6 113 aa10.85□□□□□ -0.67
GARNL3-220ENST00000496711 ANKRD11Q6UB99 2663 aaPredicted RBP10.84□□□□□ -0.67
GARNL3-220ENST00000496711 PLCE1Q9P212 2302 aa10.84□□□□□ -0.67
GARNL3-220ENST00000496711 RBFOX3A6NFN3 312 aa10.84□□□□□ -0.67
GARNL3-220ENST00000496711 TNFSF4P23510 183 aa10.84□□□□□ -0.67
GARNL3-220ENST00000496711 CCL20P78556 96 aa10.84□□□□□ -0.67
GARNL3-220ENST00000496711 SLC38A11Q08AI6 406 aa10.84□□□□□ -0.67
GARNL3-220ENST00000496711 LRRC75BQ2VPJ9 315 aa10.84□□□□□ -0.67
GARNL3-220ENST00000496711 SP5Q6BEB4 398 aaPredicted RBP10.84□□□□□ -0.67
GARNL3-220ENST00000496711 TMEM108Q6UXF1 575 aa10.84□□□□□ -0.67
GARNL3-220ENST00000496711 SPACA3Q8IXA5 215 aa10.84□□□□□ -0.67
GARNL3-220ENST00000496711 CISD2Q8N5K1 135 aaKnown RBP10.84□□□□□ -0.67
GARNL3-220ENST00000496711 RBMXL1Q96E39 390 aaKnown RBP10.84□□□□□ -0.67
GARNL3-220ENST00000496711 RSG1Q9BU20 258 aa10.84□□□□□ -0.67
GARNL3-220ENST00000496711 NCOR1P1Q9H4R4 102 aa10.84□□□□□ -0.67
GARNL3-220ENST00000496711 GCM1Q9NP62 436 aa10.84□□□□□ -0.67
GARNL3-220ENST00000496711 CALYQ9NYX4 217 aa10.84□□□□□ -0.67
GARNL3-220ENST00000496711 MARCH11A6NNE9 402 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 C16orf97H3BN30 126 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 H7C2Y5 167 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 DUTP33316 252 aaKnown RBP10.83□□□□□ -0.68
GARNL3-220ENST00000496711 LOXL3P58215 753 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 AWAT1Q58HT5 328 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 FAM201AQ5SY85 155 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 FAM122CQ6P4D5 195 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 GFRALQ6UXV0 394 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 SFT2D1Q8WV19 159 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 RARRES2Q99969 163 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 RAB9BQ9NP90 201 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 UBE2L5PA0A1B0GUS4 154 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 FLI1Q01543 452 aaPredicted RBP10.83□□□□□ -0.68
GARNL3-220ENST00000496711 AKIRIN2Q53H80 203 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 STUMQ69YW2 141 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 Q8TCH9 128 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 DTD1Q8TEA8 209 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 R3HDM4Q96D70 268 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms