RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 TMEM33P57088 247 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 TCTAP57738 103 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 RAB4BP61018 213 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 HOXC5Q00444 222 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 PRDX4Q13162 271 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 JOSD1Q15040 202 aaPredicted RBP2.17□□□□□ -2.06
CLK1-214ENST00000496205 TSNQ15631 228 aaKnown RBP2.17□□□□□ -2.06
CLK1-214ENST00000496205 ZCWPW2Q504Y3 356 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 LUZP6Q538Z0 58 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 ZFP1Q6P2D0 407 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 SBSNQ6UWP8 590 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 ATP5L2Q7Z4Y8 100 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 S100A7AQ86SG5 101 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 OOSP2Q86WS3 158 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 TMEM75Q8N9X5 138 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 ZNRF2Q8NHG8 242 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 CMBLQ96DG6 245 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 CPNE2Q96FN4 548 aaPredicted RBP2.17□□□□□ -2.06
CLK1-214ENST00000496205 REEP6Q96HR9 211 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 ABHD14BQ96IU4 210 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 PEBP4Q96S96 227 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 MED18Q9BUE0 208 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 MS4A8Q9BY19 250 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 ULBP3Q9BZM4 244 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 PCBD2Q9H0N5 130 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 C11orf49Q9H6J7 331 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 BIN3Q9NQY0 253 aa2.17□□□□□ -2.06
CLK1-214ENST00000496205 MRPL27Q9P0M9 148 aaKnown RBP2.17□□□□□ -2.06
CLK1-214ENST00000496205 FAM32AQ9Y421 112 aaKnown RBP2.17□□□□□ -2.06
CLK1-214ENST00000496205 KMT2EQ8IZD2 1858 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 IGKV2D-24A0A075B6R9 120 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 IGHV3-43A0A0B4J1X8 118 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 IGHV1-69-2A0A0G2JMI3 117 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 A0A1B0GW54 56 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 OR4C46A6NHA9 309 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 OR4C45A6NMZ5 311 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 LEUTXA8MZ59 168 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 PPP5D1E7EU14 171 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 K7ERS5 55 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 RBFOX2O43251 390 aaKnown RBP eCLIP2.16□□□□□ -2.06
CLK1-214ENST00000496205 PDE6DO43924 150 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 APOMO95445 188 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 IGHV1-46P01743 117 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 LINC00869P0C866 280 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 CTLA4P16410 223 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 ORM2P19652 201 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 CDK2P24941 298 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 GABRA3P34903 492 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 CA7P43166 264 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 HERVK_113P63121 156 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 S100A12P80511 92 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 TNFRSF9Q07011 255 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 EIF4EBP1Q13541 118 aaPredicted RBP2.16□□□□□ -2.06
CLK1-214ENST00000496205 TMEM241Q24JQ0 296 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 ARHGAP11BQ3KRB8 267 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 C1orf194Q5T5A4 169 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 LPCAT3Q6P1A2 487 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 C3orf33Q6P1S2 294 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 TCF23Q7RTU1 214 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 ZNF567Q8N184 647 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 FER1L6-AS1Q8NA97 138 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 OR2K2Q8NGT1 345 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 OR10A6Q8NH74 314 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 C2orf15Q8WU43 125 aaKnown RBP2.16□□□□□ -2.06
CLK1-214ENST00000496205 C1orf50Q9BV19 199 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 TMEM109Q9BVC6 243 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 C8orf4Q9NR00 106 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 IDI2-AS1Q9NZ38 188 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 ZNF492Q9P255 531 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 OPTCQ9UBM4 332 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 DHCR7Q9UBM7 475 aaKnown RBP2.16□□□□□ -2.06
CLK1-214ENST00000496205 RSL24D1Q9UHA3 163 aaKnown RBP2.16□□□□□ -2.06
CLK1-214ENST00000496205 DNAJC12Q9UKB3 198 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 VPREB3Q9UKI3 123 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 NISCHQ9Y2I1 1504 aa2.16□□□□□ -2.06
CLK1-214ENST00000496205 GRIN2BQ13224 1484 aa2.15□□□□□ -2.06
CLK1-214ENST00000496205 RTL1A6NKG5 1358 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 IGHV3-21A0A0B4J1V1 117 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 IZUMO1RA6ND01 250 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 OR6C6A6NF89 314 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 FAM159BA6NKW6 160 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 OR11H12B2RN74 326 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 FAAHO00519 579 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 MRASO14807 208 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 ATG12O94817 140 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 IFNA21P01568 189 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 IGHMP01871 453 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 HLA-DQB1P01920 261 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 CISD3P0C7P0 127 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 SULT1A3P0DMM9 295 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 SULT1A4P0DMN0 295 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 ATP6V0CP27449 155 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 CD34P28906 385 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 OPRM1P35372 400 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 AKR1C2P52895 323 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 HSPE1P61604 102 aaKnown RBP2.15□□□□□ -2.07
CLK1-214ENST00000496205 PSG4Q00888 419 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 FABP9Q0Z7S8 132 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 ZNF678Q5SXM1 525 aa2.15□□□□□ -2.07
CLK1-214ENST00000496205 NANOGP8Q6NSW7 305 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms